Nematolebias whitei (Rio pearlfish): 119420618
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Entry
119420618 CDS
T08042
Symbol
exo1
Name
(RefSeq) exonuclease 1
KO
K10746
exonuclease 1 [EC:3.1.-.-]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Pathway
nwh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119420618 (exo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nwh03032
]
119420618 (exo1)
03400 DNA repair and recombination proteins [BR:
nwh03400
]
119420618 (exo1)
DNA replication proteins [BR:
nwh03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
119420618 (exo1)
DNA repair and recombination proteins [BR:
nwh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
119420618 (exo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
XPG_I_2
TPR_2
Motif
Other DBs
NCBI-GeneID:
119420618
NCBI-ProteinID:
XP_037543965
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All DBs
Position
1:complement(86949346..86972885)
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AA seq
771 aa
AA seq
DB search
MGISGLLQFIKDAAEPVNVKKYKGQTVAVDTYCWLHKGAFSCAEKLAKGEPTDQYVQYCM
KFVDMLLNFGVKVILVFDGRNLPSKQEVERARRERRETNLQKGRQLLREGKLSEARDCFT
RCVNITPTMAHNLIKAARDRGVDCVVAPYEADAQLAYLTKSGLAQAVITEDSDLLAFGCK
TVILKMDKQGNGLEVDQSNMGRCRSLGNVFTEEKFRYMCILAGCDYLPSLHGIGLGKACK
LLRLAKDPDILKVIRKMGQYLKTNLIIPEQYIEGFVRANNTFLYQLVFDPVRRKVVPLNP
YPEHIDPATLSYAGLNLEEDKGLEMALGNLDVNTLERIDNFNPDKPNVQRCKARSNSWND
SPTSAGSSIWSRGFTPASGGSSPRPAASPDRPPSTRGREGVVSLGGLKLPSRELQVKRPR
EDSCLSDQEVLQLYSSPGQKRSKSEQQPHKTPLRPQPRPRNRFATLLQRRNQETEEEAGH
LTRSRFFSGSSSVTSLSTESNQEVEPTAGDPSEDKSSLSIHTHDIPPEVTPSPPLSSSSS
SPSSASRGFKLFQWSGGSSSAEPSSTTKSTMGLGALQQFQYKKESFTSQKIHSASGGSTP
PQSSSPDKNLEDELSDSPPSQDSAYFSHSQSSRISFHKEESLTYSLEDAASEMNSSTEVE
PEPESHVCSAEAERKAAVLGSKVSGLSRVKSSSGSPTATVRSLGPARASGLRKKSVGSVK
KCSSTNNENNPGVQATISSLWKNYSFKTDAQKMTSRKTEPMSPFKDNLLVH
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgggaatctctggattgttgcagttcatcaaagatgcagccgagcccgttaacgttaaa
aagtataaaggccagacggtagctgtcgacacgtactgctggctgcacaaaggagctttc
tcttgtgctgagaagcttgctaaaggggaaccaactgaccagtatgtgcagtactgcatg
aagtttgtggacatgctgctgaattttggcgtgaaagtcattctagtgttcgatggacgc
aacctgccttccaaacaagaggtggaaagggctcgcagagagcgcagagaaactaatctt
caaaaaggccgacagctgctgcgtgaaggtaaactgtctgaggcccgagactgtttcacc
cgctgtgtgaacatcacccccaccatggcccacaacctgattaaggctgcccgggacaga
ggcgtggactgtgtggtggctccttatgaagcggatgctcagttggcgtacctgactaaa
tctggtctggctcaggctgtcatcactgaagactcggacctgctggcatttggctgcaaa
acggtgattctcaaaatggacaagcagggcaatgggctggaagtagaccagagcaacatg
ggccgctgtcgctccctgggcaacgttttcactgaggagaagtttcgttacatgtgcatc
ttggccggctgtgactatctgccctccctacacggcatcggcttggggaaggcctgcaag
ctgctgcggctggccaaagaccccgacatcctgaaggtgatcagaaagatgggtcagtac
ctgaaaacaaatctgatcatccctgaacagtacatcgaggggtttgtcagagccaacaac
accttcctgtaccagctggtgttcgatcctgtcaggaggaaagtggttccattaaacccg
tacccagagcacatagatccagccaccctcagctatgctggcctaaatctagaagaggac
aaaggtttggaaatggccttgggaaaccttgatgtcaacactttggagaggattgacaac
ttcaatccagacaaacccaacgtacagaggtgtaaggctcgcagtaacagctggaacgac
tcgccaacctcagctgggtccagcatttggagcaggggcttcacacctgcctctggtggc
tcttctcctcgccctgctgcttctccagaccggcctccctccaccaggggaagggagggg
gtcgtcagcctggggggcctgaagctgccctccagagagctacaggtgaaaaggcccaga
gaagattcttgtttatctgaccaggaagtcctccagctgtattcctctcctggacagaag
cgatccaaatcagaacagcaaccacacaagactccactcaggcctcagccccgaccacgc
aaccgcttcgccacactgctgcagaggaggaaccaggagacagaggaggaggccggccat
ctcacccgcagcagattcttcagtggctccagttcagtaaccagtctgagcacggagtcc
aaccaggaggtagagcccacagctggtgacccttctgaggacaaatcctctctcagcatc
cacactcatgacatcccgcctgaggtaactcctagtccacctctgtcctccagcagctcg
tcccccagttcagccagtcggggtttcaagctgttccagtggtcaggaggctcctcttca
gccgaaccctccagtacaacaaagtccaccatgggcctgggcgccctgcagcagtttcag
tacaagaaggagagttttacatctcagaagatccacagcgcctctggaggctcaacgccc
ccacagtcctcatctcctgataaaaatctggaggacgaactctctgactcacccccctcc
caggacagcgcttacttctcccactcccagtcctcgcgcatttccttccacaaagaggaa
tctctcacctacagcctggaggatgctgcatctgaaatgaactcaagcactgaagtagaa
ccagaaccagagagtcacgtttgttcagcagaagcagaaaggaaagctgctgtgctgggg
tcaaaggtttcaggactgtcgagggtgaagtccagcagtgggagtccaacagccacggtg
cggtctttgggtccagccagagccagcggtctgaggaagaagagtgttggttctgtgaag
aaatgctcgtctacaaataatgagaacaaccctggagtccaggccaccatcagcagcctg
tggaagaactacagcttcaaaacggacgctcagaagatgacttcccgtaagacggagccc
atgtctccattcaaagacaacctgctggtccactga
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