Nematolebias whitei (Rio pearlfish): 119422215
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Entry
119422215 CDS
T08042
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nwh01002
]
119422215 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119422215 (usp47)
Enzymes [BR:
nwh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119422215 (usp47)
Peptidases and inhibitors [BR:
nwh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119422215 (usp47)
Ubiquitin system [BR:
nwh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119422215 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
119422215
NCBI-ProteinID:
XP_037545508
LinkDB
All DBs
Position
2:complement(4704146..4723425)
Genome browser
AA seq
1360 aa
AA seq
DB search
MEIVPSEENQFVPKEIQNAAEEPRVLCIIQDTTSAKTINERLTLNLPASTTLSKLYEDIA
HKAGYVTGTFELAWGNITDMAPLEQNSEMSLSSAGFQPGKKNFLQLTDKDGEQPQIASDE
SGAADSSGLDDSSQEQFIGPLQRDGSAGGSGDYSSPLYSYSSILSKSETGYVGLVNQAMT
CYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETTDV
TRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECGY
ESWRIDIYLDIPLVIRPFGASQAYGSVEEALQAFIQPETLDGPNQYFCERCKKKCDARKG
LRFLHLPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSPFIDVEDEKSPQTESCTD
SGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTSNTERALKPKSLLTFELFSVMVHSGSA
AGGHYYAYIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGSSGSRGYYSSAFASSTNGYML
IYRLKDPSRNAKVLDVEDFPEHIKSLVQKEKESEEQEKRQREIERNTCKIKLFCMHPVKM
MMESKLEVHKDKTLKEATEMSYKMMELEGVVPLECCRLVKYDEFHEYLERSYEGEEDTPM
GLLLGGVKSSYMFDLLLESRRPEQVFQPYKPGEVMVKVHVVDLKTESIASPISVRAYLNQ
SITEFKLLIAQATGLSAETMRVVLERCYNDLRLLHVPNKTLKAEGFFRSNKVFVESSELS
DHQVPFSDSLLWKLLDRHGNTIRLFVLLPEQSPGTLANRTVCQKVGEDCDGPFEGSKDNR
KSVEAILEESTEKLKNLSLQQQGSSTSDSQKSSDASDFEHIESPIQEADSNASLCVAADN
RELENRIKATPSGGASYDTENQFACEERSDSEVNNDRSTSSVDSDILSSSHSSDTLCNAD
SGPIQLANGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDDNGKSKAEAQYLYFR
AEPYAQEEALWETQKCVVVHVDKRITLAAFKQRLEPYVGVMSSQFKVFRVYANNQEFESV
RLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLANEPEPCKFLVDTVFAKGMTVRQS
KEELLPQLKDQCKLDLCIDRVRLRKKTWKNPGTVFLDYHVYEEDISISSNWEVFLEVLNE
PEKMKSMSQLAILTRRWSPATMKLGPFQEVILESSSADELKEKLSEIGGIPLEDLEFAKG
RGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVVFYRDSREEPLELSEDERNEL
LKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPLRDPGQD
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgtgcctagcgaggagaaccagttcgtacccaaagagatacagaatgcagct
gaggagcccagagtgctgtgtataatccaggacaccaccagcgcaaaaacgatcaacgag
aggctgaccctcaacttgcctgcttccacaactctttccaaactttatgaggacattgca
cacaaagctggatatgtgaccggcacgtttgagctcgcatggggaaacattacggacatg
gcgcccctggaacagaacagtgagatgtccctctcaagcgctgggttccagcctggtaag
aagaattttcttcagcttacagataaagacggagagcagccgcagattgcatcggatgaa
tcaggagcagcggatagcagtgggctggatgacagctcccaggagcaatttattggaccc
ctacaaagagatggtagtgcaggtggcagcggcgactacagcagcccattatactcctac
tcatctatcctcagtaaatctgagacaggttacgtaggcttggttaaccaagctatgaca
tgttatttgaacagtcttctgcaaacgctttttatgacaccagagttcagaaatgcactc
tataactgggagtttgaggagtcggaggaggatccagtcaccagtataccataccagctg
caacggctgtttgttttgctgcagaccagcaagaaacgggccattgagaccaccgatgtg
acgaggagcttcggttgggatagcagtgaggcttggcagcagcatgatgtccaggaactg
tgcagggtcatgtttgatgccctggagcagaaatggaagcaaacagaacaggctgatctg
atcaaccagttgtatcaagggaagttgaaagattatgtgcgctgtttggagtgcggctac
gagagctggagaatcgatatttacttggacatccctcttgtgatcagaccttttggagcc
agccaggcctatgggagcgtggaggaggctttgcaggcattcatccagcctgaaactctg
gatgggcccaaccagtacttctgtgaacgctgcaaaaagaagtgtgatgctcgaaagggt
ctgagatttctgcacttgccctacctgctgacattacagctgaaaaggtttgattttgac
tacaccactatgcatcgcattaagctaaacgaccgcatgactttccctgaggagcttgat
atgagtccattcatcgatgtagaagatgagaagtcgcctcaaacagagagctgcactgat
agtggtgcagagaatgaaggcagttgccacagtgaccaaatgagcaatgatttttccact
gatgactgtgtggacgagggcatctgcttggacagcactagcaacacagagagggcgctg
aagccaaagagcttgctgacttttgagctgttttctgtcatggtccattcgggaagtgcc
gcaggtggtcactactacgcctatatcaagtccttcagtgatggtcagtggtacagcttc
aatgatcaacatgttagtaagatcacccaggatgatattaggaaaacatacgggggttcc
tcagggagcagaggctattattccagtgcctttgcaagttctacaaatggatatatgctg
atttatagactgaaagatccctcaaggaacgcaaaggttttagatgtggaagactttcca
gagcacataaagagtctggttcagaaggagaaagagtctgaggagcaagaaaaacgccag
agagagattgagcgcaacacttgcaagatcaagcttttctgcatgcatcctgtaaagatg
atgatggagagcaagttggaagttcacaaggacaaaacgctgaaagaagcaacagaaatg
tcctacaagatgatggagctggaaggagtcgttcctctggaatgctgtcgcttggtaaaa
tacgatgagtttcacgagtatctggagagatcgtacgaaggagaagaagacactcccatg
gggctcctcctcggaggtgtcaagtcttcatacatgttcgacctgcttctcgagtctcgc
aggccagaacaagtgttccagccttacaaacctggagaagtgatggtgaaggttcatgtt
gtggatctgaagaccgagtccattgcctctccaatcagtgttcgagcatacttgaaccag
tcaatcactgaattcaaactgctcattgcacaggctacagggctttctgcagaaaccatg
cgagtagtcttggagcgctgctataatgacctccggctccttcatgttccaaacaagacg
cttaaagccgagggattctttaggagtaacaaggtgtttgtagagagctctgagctgtcg
gatcatcaggttcctttctcagactcgctcttgtggaagctcttggatcgtcacgggaat
acgatccgactctttgtcttactgcctgagcagtctcctggtaccctggctaacagaact
gtttgccaaaaagtgggagaagactgcgatggaccctttgagggttcaaaagacaacagg
aaatccgtagaagctattctcgaggaaagcaccgaaaaattaaaaaacttgtctttgcag
cagcaggggtccagcacaagcgacagccaaaaaagctcggatgccagtgactttgagcac
atcgagtctccgatccaagaagcggactcgaacgcttcgctctgcgtggctgcagacaac
cgagagttagagaaccggatcaaagccacacccagcgggggcgcctcatatgacaccgag
aaccagtttgcctgcgaggaacggtcggactctgaggtgaacaatgatcgtagcacgagc
tcagtggacagtgacattctgagctccagccacagcagcgacacgctgtgtaacgcagac
agcggccccatccagctggccaacggcttggattcacacagcattacaagtagccgacgg
tccaaagcccacgaggggaagaaagagacgtgggacactgctgaggaagactctggaaca
gacagcgagtacgacgacaatgggaaaagcaaagcagaagctcagtacctgtacttcaga
gcagaaccttacgctcaggaagaagctttatgggaaacacaaaaatgcgtggtggttcat
gtggacaagagaataacgttggcagcgttcaaacagaggttggagccttacgtaggtgtg
atgtcatcccagttcaaggtgtttcgggtttatgccaacaaccaggagttcgagagcgta
cgtctcaatgaaacactttcgtcattctccgacgataacaagataaccattcgacttgga
agagctctgaaaaagggtgaatacagagttaaagtgtatcagcttctagcaaatgaacca
gagccttgtaaattccttgtggacacggtgtttgctaagggcatgaccgtcagacagtcc
aaggaggagctgcttcctcagttaaaagatcagtgcaagcttgacctctgcatcgacagg
gttcgcctcagaaaaaagacctggaagaatccaggcacagtgtttctggattaccacgtc
tacgaagaagacatcagcatttcttccaactgggaggttttcttggaagtccttaatgaa
ccagagaagatgaagtccatgtcgcagctggccattctgactcgacggtggagtccggct
acaatgaagcttggtccgttccaggaggtgattctggagagcagcagtgcagacgagctc
aaggaaaagctcagtgaaatcggtggtattcctcttgaagacctggagtttgcaaagggc
agaggaacattcccttgtgacatatcggtgttggaaatccatcaggatctggactggaac
cctaaggtgtcaacccttaatgtgtggcctctttacatctgtgatgatggcgctgtggtc
ttctacagggacagcagagaggaacctctggagctctcggaggacgagcgtaacgagcta
ctgaagaaggaaagcagtcgactgctgaagacgggacatcgtgtcagttactctccgcga
aaagagaaggccttgaagatctacttggacggtggtcccctgagagaccccgggcaggac
tga
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integrated database retrieval system
