Nematolebias whitei (Rio pearlfish): 119423030
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Entry
119423030 CDS
T08042
Symbol
sema6dl
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like
KO
K06842
semaphorin 6
Organism
nwh
Nematolebias whitei (Rio pearlfish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
119423030
NCBI-ProteinID:
XP_037546372
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Position
2:14161987..14196588
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AA seq
1108 aa
AA seq
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MGRGAVLLLSGLLLLMLTASRTLLAVSFPEDTVPLDVVDAHFTRRYPVFRGKLSGNESQH
RLDFQLMTKIQDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGQADREMCAVKGKHR
DECHNFIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLEFDGEEINGLARCPFDSKQTNV
ALFAEGKLYSATVADFQASDSVIYRSLGDGSALRTIKYDSKWLKEPHFLHAAEYGNYVYF
FYREIAVEHSNLGKVVYSRVARICKNDVGGSQRVLEKHWTSFVKARLNCSVPGESFFYFD
VLQSITDIIDINGVPSVVGVFTTQMNSIPGSAVCAFSMAHIEKVFSGRFKEQKTPDSVWT
PFPEEKLPKPRPGSCAGHGPAASFKSSVEFPDDTLQFIKSHPLMDTAVPSIGDEPWFTRT
RVRYRLTALAVDNQAGPHKNHTVVFIGSESGVVLKVLAKTSSVSMDDSLLLEEIDIFNRA
KCLSSREDDKRVLSLHVDKDAHSLYVAFSSCVIRIPLSRCERHSSCHKSCVASRDPYCGW
RPHGACERIQPGVLTGYEQDVELGNTVHLGDCQAFLGTTSAPDYKSFGDPTSDMEFPSAP
VPVQPSEPVQPPVLIPSQNPSPEPTPELYGSGFALQDDPATSHSLNSVPGGREGIWDNHT
GDSDQMVHMNILITCVFAAFLMGALLAGLIVFCYRDSFLRKPKHVHKDAESAPSCSDSTG
SFVKLNGLFDSPVKEYQANIDSPKLYTNLLTNGKDLNTPNGDIKTMIMRDSCQPPELAAL
PTPESTPVLQQKGLQPIKNQWEKAHGKVSGSRKESNSSAKSPQFLSSPSPVNGNSHHPHP
ALGHSNIPSAVVLPNATHDHPNLEDEDETLPHSSEKIKNPDTKGSKKDQKRAVDARNTLN
DLLKHLNDSVANPKAILQEGSGPRPRPQLTLEPMEELTEIPPKVPSREASLYSPSSSLPR
HSPTKRVDVPMPSSPTTPTGSLSMGGTLERQRGGYQLHRSASHRQSLSTSTNGVTMGVSV
SRQHSMNRGGYMPPTPPSRLDSHCAVMASGMHSPNQSSVSRQSSYSGHGSLPRTGLKRTP
SIKPDVPPKPNGFPPQTPQMRVVNKYSY
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaggagctgttcttctgctcagtgggctcctgctgctgatgctgacagcttca
cgcactcttctcgcagtcagcttcccggaggacaccgtgccgctggacgtcgtcgacgca
cactttactcggaggtaccccgtgttcagaggaaagctctcgggcaacgagtcgcagcac
cgcctcgactttcagctgatgaccaagatccaggacacactgttcatcgctggcagagat
caggtgtacctcgtcagtctgagagaatcctacaggaacgagatcattccttaccggaag
ttaacgtggcgctcgggccaagctgaccgagagatgtgtgcggtgaaaggaaaacacaga
gacgagtgtcacaacttcatcaaggttctggttcccagaaacgatgacctggtgttcatc
tgcggcaccaacggcttcaaccccatgtgccggtactaccggttggataaccttgagttt
gatggggaggagatcaacggtctggcacggtgcccgtttgactccaagcaaaccaacgtg
gccctcttcgctgaagggaagctgtattctgctactgtggctgacttccaggccagcgac
tccgtcatctatcgtagtctgggcgacggctcggccctgaggaccatcaagtacgactcc
aagtggctgaaagaacctcatttcctgcatgcagcagagtacgggaattatgtgtacttc
ttctaccgagagattgcagtggaacacagcaatctggggaaggtggtgtactcccgagtg
gctcggatctgtaagaatgacgtgggcgggtcacagcgggtcctggagaaacactggacg
tcttttgtgaaggcgaggctgaactgctccgtgccgggggagtccttcttctactttgac
gtgcttcagtccatcactgacatcatcgacatcaacggggttccctcggtggtgggcgtg
ttcacgacccagatgaacagcatcccggggtctgcggtgtgtgccttctccatggctcac
atagaaaaggtcttctcaggccggttcaaggagcagaagacccccgactctgtgtggact
ccgtttccagaagagaagctgcccaaacctcggcccgggagctgcgcgggtcatggtccg
gcagcgtcctttaagagctccgtggagtttccagatgacacgctgcagttcatcaagtcc
caccccctgatggacacagcagtgccgtccatcggggacgagccttggttcaccaggacg
cgcgtccgctacaggctaacggcgctagctgtggacaaccaagcaggaccccataagaac
cacacggtggtcttcattgggtcagagtccggggtcgttctcaaggttctagccaagacc
tcctcggtgtccatggacgacagcctgctcctggaggagatagacatcttcaacagagcc
aagtgcctgtccagccgtgaggacgataagcgtgtcctctccctgcacgtggacaaagac
gctcacagcctttatgtcgccttttctagctgcgtcatccggatacccctgagtcgctgt
gagaggcactcttcctgccacaagtcctgcgtcgcctccagagatccgtactgtggctgg
aggcctcacggagcatgtgagaggatccagcctggagttctgaccgggtacgagcaggac
gtggaacttggaaacacggtccacctcggagactgtcaagcgtttttgggcactacttca
gctccagattacaaatcatttggcgacccgacctctgacatggagtttccatcagcacca
gtccctgtccagcccagtgagcccgtacaacccccagtactcataccgagtcagaacccc
agccccgagcccactccagagctctacggctcgggctttgctctgcaggacgacccggcc
acctcccactctttaaactctgtgccgggggggcgagagggtatttgggataatcataca
ggtgacagcgaccagatggtccacatgaacatcctcatcacctgcgtctttgctgctttt
ctcatgggcgctctgctggccggactgattgtgttctgctacagagactctttcctccgc
aaacccaaacatgtccacaaggacgcagagtcagcgccgtcttgctccgactctaccggg
agttttgtgaagctcaacggcctctttgacagccctgtaaaggagtaccaagccaacatc
gactctcccaagctgtacaccaacctgctgacgaacggtaaagacctgaacacgcccaat
ggtgacatcaagaccatgatcatgagggacagctgtcagcccccagagctggctgctctg
cccacacccgagtccacccctgttctccagcagaaaggcctgcagcccatcaagaaccag
tgggagaaggcccatgggaaggtcagcgggtcccgtaaagagtccaactcatcagccaag
agtccacagtttctctcatctccttctcccgttaatggaaattcccaccatccccaccct
gccctaggacactcaaatattccaagtgcggtcgttctgcccaacgctactcatgaccac
ccgaacctcgaggacgaagatgagactttgcctcattcatctgaaaagataaagaacccg
gacactaaagggagtaaaaaagatcaaaagcgagcagtggatgctaggaacacgttgaat
gatcttttaaaacatcttaatgactctgtggccaaccccaaggccattcttcaagaaggt
tcagggccccgcccgagaccacagctcacactggagcccatggaagaactgactgaaata
ccccccaaggtgcccagtcgagaggcttcgctgtactctccttcctcctccttaccaaga
cacagccctaccaaacgagttgatgttcccatgccttcctcccccaccaccccaacagga
agcttgagcatggggggcaccttagagaggcaaagagggggttaccagctccaccggagt
gcctctcacaggcagtccttatccacttcaacaaatggggtaactatgggggtgtctgta
tctcgccagcacagtatgaacagaggtggttacatgcccccaacacctccctccagactg
gactcccactgtgcggtgatggcatcaggaatgcactcacccaaccaatcttctgtgtcc
cgacagagcagctacagcgggcacgggtcgctccctcgcacggggctcaaaaggactcca
tccataaaaccagacgtgccccctaaacccaacgggtttcctccacagactccacagatg
cgagtagtcaacaagtacagttactaa
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