Nematolebias whitei (Rio pearlfish): 119423058
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Entry
119423058 CDS
T08042
Name
(RefSeq) VPS10 domain-containing receptor SorCS1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nwh04131
]
119423058
Membrane trafficking [BR:
nwh04131
]
Protein recycling
Others
Others
119423058
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
APC1_3rd
Motif
Other DBs
NCBI-GeneID:
119423058
NCBI-ProteinID:
XP_037546395
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All DBs
Position
16:complement(8674511..8861154)
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AA seq
1009 aa
AA seq
DB search
MLGRPIQFKVGSFWKWQTAKEQPASFTRCPKPCRVYVSASNATSFPDSFLSSDSGNIIET
NKQRIMLLTDPEVESSLLISSDEGATYQKYRLNFYILSLLFHPEQEDWILAYSHDQKLYS
SVEFGRRWQLVHERVAPNRFYWSKMGLDKEPGLIHLETSISEGQALYVTCKLQNCTDANK
GKPFPGYIDPNSLVVQDEYVFVQVSTAGRPVYYVSAKRDIFTPMKLPKYTLPKELHVIST
DENRVVAAVQEWNQNETYNLYVSDTSGVFYTLALENVVSSMGLEGNVMVDLYEVAGIKGM
FLANKKTDNQVKTYITYNRGRDWRLLQAPSKDLRGGSIHCVLPYCSLHLHLHVSANPYTS
GNIASRESAPGIIVASGSIGAELTSSNVSVFITSDAGNTWRQIFDEEYAVLYLDQGGALV
AIRHTPLPIRHLWLSFDKGRQWNKYSFTNTPLFVDGVLGEPGEETLIMTIFGHVSHRSEW
QLVKIDFRSIFNRRCTEADYQTWHLHNQGEPCLMGVKRIYRKLKPTSRCVMGKTYSVTMT
SGSCDCTEADFECDYGYERRTDGKCSPAFWFHPSSTSRSCTTGMMFLNSTGYRKVVSNNC
TAGVIAEYTARRQQCPIQAPRGLHLVTSEGTLTATLATNVTFLVFLEEGDGVRTSITVDF
GDGHALTYSNVSSMDDGIKHIYKTVGIYRVTATAENSLGSETASLYLHVTCQLEHIHLSA
PFVAMKNKEVNLTAVLWPSQVGTVTYIWWIGNNTEPLITLEGSVACTFSREGINSVTVQV
SAGSAILQDRKTIAVHEYFRSHLLAFSSNLDEHNPDVPEWRLDVSRVIRNALIQATGVSE
DQLLVTVLPGLPTAAEFFLLPDKQKTEGKPEKSSAHLDQLSEVLLSALNQNLVQFTLRPG
VQVTVYTAHLSAAPLVDTGENHSGSAMLMLLSVVVAGLAVFVIYKFKRKIPGLNVYAQMQ
DEKEQEMTSPADPTKATPSSRQDLVPSLEILDTEFNSRPIVKWSGLQKD
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgctgggtcggcccatccaattcaaagtgggatctttctggaaatggcaaactgccaag
gagcagcctgccagcttcaccaggtgcccgaagccctgtcgtgtatacgtgtctgcaagc
aacgctacgagttttccagattccttcttatccagcgattcagggaacattatagagaca
aacaaacaacgaattatgctgctgactgatccagaggtggagagcagccttctgatcagc
tccgacgaaggagcgacctaccagaagtaccggctgaacttctacatcctcagcctgctt
ttccaccccgagcaagaggactggatccttgcgtacagccatgaccagaagctctacagc
tcggtggagtttggtcgacgatggcagctggtgcacgagagagtggctccgaatcgtttc
tactggtcgaaaatgggtttagacaaagagcctggtctaattcacctggaaaccagcatc
tctgaaggacaggcgctgtatgtcacctgcaagctgcaaaactgcaccgatgccaacaag
ggcaaaccattccccgggtacattgaccccaattctctggtggtgcaagatgagtacgtg
tttgtccaggtgtccactgctgggaggccagtctactatgtttctgcaaaaagagacatc
ttcacccccatgaagctgcctaagtacaccttgccgaaggagctgcatgtgatcagcaca
gacgagaaccgtgtggtggccgccgttcaggagtggaaccagaatgaaacctacaacctg
tatgtgtcggacacctcgggggtcttctacacgctggccctggagaacgtggtcagcagc
atgggcctggaggggaacgtcatggtcgacctctatgaggtagcgggaataaagggaatg
ttcctggcaaacaaaaagacggacaaccaagtgaagacgtacatcacctacaacagaggc
agagactggaggttgctgcaagccccgagcaaagacctgcggggcggcagcattcactgt
gtgctgccgtactgctcgttacatctccatctccatgtgtctgcaaacccctacacgtct
ggaaacatcgccagcagggagtcggcgccagggatcatcgttgcttcaggctccatcggc
gcggagctgaccagcagtaacgtcagcgtgttcatcacctcggatgcagggaacacctgg
agacagatctttgatgaggagtacgctgtactttatctcgaccaaggtggagccttggtg
gcaataagacacactccgcttcccatccgacacctgtggttgagcttcgacaaaggacga
cagtggaacaagtacagcttcaccaacacgcctctgtttgtggacggggtcctgggagag
cctggggaggagacgctcatcatgacgatcttcggtcacgtcagtcatcgctccgagtgg
cagctggtgaaaatagacttcaggtccatcttcaaccggaggtgcacggaggcagactac
cagacgtggcacctacacaaccagggcgagccgtgtctcatgggcgtgaaacggatctac
cggaagctgaagcccacctccaggtgcgtgatgggaaagacgtactcggtgacgatgacg
tcaggatcctgcgactgcacggaggcggacttcgagtgtgactacggctacgagagacgg
acggatggaaagtgcagcccggctttctggttccatccatcgtccacgtccaggagctgc
accacaggaatgatgttcctcaacagcacgggttacaggaaggtggtgtctaataactgc
acagccggagtgattgcggagtacacggcccggcggcagcagtgccccatccaggctccc
cgaggtctccacctggtcaccagtgagggcacgctgaccgccacgctggccaccaacgtg
accttcctggtttttctggaggagggggatggcgtgaggaccagcatcaccgtggacttc
ggagatggccacgccttgacgtattccaacgtgagctccatggacgacggcatcaaacac
atctacaagaccgtgggaatctaccgggtgacggccacggcggagaacagcctcggctcg
gagaccgccagtctctacctgcacgtgacatgtcagctggagcatatccatctctccgct
ccctttgtggcgatgaagaacaaggaggtgaacctgactgcggttctgtggcccagccaa
gtgggaacggtcacctacatctggtggatcggaaataataccgagcctttaatcaccctg
gagggaagcgtagcgtgcacgttctcaagggaaggcatcaacagcgtcacggtgcaggtg
tctgctgggagtgccatcctgcaggacaggaagaccatcgccgtccacgaatacttccga
tctcatctgctggccttttcgtccaacctggatgagcacaaccccgacgttccagagtgg
aggctggatgtgagccgtgtcatcaggaacgccctgatccaggccacgggcgtgagcgag
gaccagcttctggtcaccgtcctcccagggttacccacagcagctgagtttttcctcctg
cccgacaaacagaaaactgaagggaaaccagagaagagctcggctcatttagatcagctc
tctgaagttttgctgagtgccttgaatcagaatcttgtccagttcacgttgcggccgggc
gtccaagtcacagtgtacacagctcacctgtcagcagcgccccttgtggacaccggtgag
aaccacagcggctctgccatgctaatgctgctgtcggtggtggttgcagggttagctgtg
tttgtcatctacaagttcaagaggaagatcccaggcctcaacgtctatgcgcagatgcag
gacgaaaaagaacaagaaatgacgagtccagctgatccaacaaaggccacgcccagctca
cggcaggacctggtgccttctttggagatcctggacaccgagttcaactcacggcccatc
gtgaagtggtccggactacagaaggactga
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