Nematolebias whitei (Rio pearlfish): 119424467
Help
Entry
119424467 CDS
T08042
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1
KO
K26273
protein strawberry notch
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nwh03036
]
119424467 (sbno1)
Chromosome and associated proteins [BR:
nwh03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119424467 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
BUD22
Motif
Other DBs
NCBI-GeneID:
119424467
NCBI-ProteinID:
XP_037547880
LinkDB
All DBs
Position
18:complement(40612019..40642148)
Genome browser
AA seq
1407 aa
AA seq
DB search
MEPGQDLLLAALSESGICPNDLGLLDIDSQDVIQPSTAQQSISISALDVGVGTESVEVVR
PEPSTAVPIVTIRHKPQPSTTTFVLNQLNQLPSLGAAAAKQSVTNPIKHTITVTKVVHVA
NSALRGPSAPTTTSVPHSVSAVVPSNKDQQIQLKDLLRTGNVKNMGLKSNSLKELMKLKP
PPDIAPPVATATATTSGDVNNGIKKDVFGKDGARLWVKDDVKIQNLSNSLKAPGLKEEDE
PEEEEEDELGHAETYAEYMPLKLRIGLRHPDPVVETSSLSSVNPPDVWYKLSIPEEVIDR
GCLSALQLEAITYAAQQHETFLPSGDRAAYLIGDGAGVGKGRTIAGIIYENYLLGRKRSL
WFSVSNDLKYDAERDLRDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGE
SQSGGKYKTRFQQLLHWCGDDFDGAIVFDECHKAKNVCPIGSSKPTKTGLAVLELQNKLP
KARVVYASATGASEPRNMAYMNRLGIWGHKTPFREFGNFIQAVERRGVGAMEIVAMDMKL
RGMYIARQLSFTGVTFKIEEVPLTQQYITMYNKSVKLWVTAREKFQQAANLMEAEQRMKK
SMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVQNGKCVVIGLQSTGEARTLEALEEGG
GELNDFVSTAKGVLQSLIEKHFPAPDRQKLYSLLGIDLSAKKTQSLKDAAPEPEQKGKKR
KGPDLKKQQNKRPRKHGGLSGTSSESESDESDKESGKDSDDSFKSVSSADEDDDFNPFRD
ESDDDEEDDPWLIRKEPKKRKEKNKKKKRKSIDPDSIQSALLASGLGSIRPGFTTSVTPS
TPAPVKTETQESFLTSQDSVELAQKMKKELLEQLEELSEDLPPNTLDELIDELGGPENVA
EMTGRKGRVVSNDDGSITYETRSELDVPVEILNLTEKQRFMDGEKNIAIISEAASSGISL
QADRRVQNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISKLAGEQRFASI
VAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVKLDCPLVSPPSDFK
GDFFKEIQGGLIGVGLINVEDRSGVLSLDKDYNNMGKFLNRILGMEVHQQNALFQYFSDT
LAAVIQEAKKNGRYDMGILDLGSGDEKVKKLDCRKFLTPGYTASGHVELYTVGVERGMSW
EEATHAWAEQNGPDDGFYVQLRNNKKTSILIKEVNTKKRLFLVYRPNTGRQLKLETYADI
KKKFKKVLSEDAKQHWTDQYQSSGKICSHAYWRGNCKKASLGLMCEVGLRCRTYYVLCGS
VLSVWNELEEVLSPVSGTNVKVQIVRLRTEDGQRIVGLIIPANCVSPLLNKLSTSDQSQQ
LAVQEQHKRQQLHPQSLSHAPVPALSS
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggagcctggacaggatttactcctcgctgctttaagtgaaagtggaatttgtccaaat
gatcttggtttattagacatagactcccaggatgttatccagccttccacggcccaacaa
tccatctctatcagtgctctggatgttggtgtgggaacagaatcggtggaggtcgttcga
ccggagccctcaactgcagtccccatcgttacaatcagacataaaccgcagccatcaacc
accacgtttgtcttaaatcagctgaatcagttgccgtcgcttggagctgctgcggccaaa
cagtcggttaccaacccaatcaagcataccataactgtcaccaaggtcgttcatgtggct
aattcagctctgcgagggccatcggcccccacgactacaagtgttccccattcagtgtct
gcagtagtgccttctaacaaagatcagcagattcagttgaaagacctacttcgaactggc
aatgtgaagaacatgggtctaaagagcaacagcctaaaagagctcatgaagttaaaacct
ccacctgacatcgctccgcctgtggcaacggctacagccacgacttcaggtgacgtgaac
aatggaatcaagaaggatgtgtttggtaaagacggtgccaggctctgggttaaagatgac
gtcaaaatacaaaacctttcaaattctctgaaagccccagggctaaaggaggaagatgag
cctgaggaggaagaggaagatgagctcggtcacgcagagacctacgcagagtacatgcca
ttgaaactgagaatcggcctgaggcatcctgatcctgtggtggagaccagctctctgtcc
agtgtgaaccctccagatgtttggtacaaactgtccatcccagaggaggtcattgatcga
ggctgcttgtctgctctgcagctggaagccatcacctacgcagctcagcaacacgagacg
ttcctccccagcggtgacagagctgcctatctgatcggtgatggcgccggcgtggggaaa
ggccgcacgatcgcagggatcatttacgagaattaccttctgggcagaaagagatctctt
tggtttagtgtttcaaatgatttgaaatatgacgctgaaagagatttaagggacatcgga
gcaaagaatattcaagttcattcactgaacaagtttaaatacggcaaaatctcctcgaag
cacaacggcagcgtgaagaaaggcgtaatcttcgccacatactcgtctttgataggagag
agccagtccggaggaaaatacaagaccaggttccagcagctcctccactggtgtggagac
gacttcgacggggccattgtctttgatgagtgtcacaaagccaaaaacgtgtgtcccatc
ggctcgtccaagcccacaaaaactgggcttgcagtgttggagctgcagaacaaactcccc
aaagcgcgggttgtgtacgccagcgccacaggtgcctctgagccacgaaacatggcctac
atgaaccggctgggcatctggggccataaaacacctttcagagagtttggaaattttatt
caagctgtggagcgaagaggcgttggggccatggagatcgtagctatggacatgaagctc
cggggcatgtacattgcaagacagctgagtttcaccggagtgacgttcaagatcgaggag
gttcccttaactcagcagtacatcaccatgtacaacaagtctgtgaagctgtgggtgact
gcacgggagaagttccagcaggctgcaaacctcatggaagcagagcaacgcatgaagaag
tccatgtggggtcagttctggtctgcccatcagaggttctttaaatacctctgcattgcc
tctaaagtccgccgggtggtccagctcgccagagaggaggtccagaacggaaagtgtgtg
gtgatagggcttcagtccaccggtgaagcgagaacactggaggccttggaggaaggagga
ggagaactcaacgattttgtatcaacagcaaaaggtgtgctacagtccctgatcgagaag
cattttcctgctccggacagacaaaaactttacagcttgctggggattgacctttcagcc
aagaagacgcagtccctcaaagacgctgccccagagccggagcagaaagggaagaaaagg
aaaggtccggacttgaagaagcagcagaataaaaggccgcgcaaacatggcggcctgtca
ggcacgagttcggagagcgagtcggatgaatctgacaaagaatccggtaaagacagcgac
gacagcttcaaatctgtcagctcagcggacgaagacgacgattttaacccgttcagagac
gagtctgacgacgacgaggaagacgatccgtggctcatcaggaaggaacccaagaaaagg
aaggagaaaaacaaaaagaagaagaggaaaagcatcgatccagattccatccagagtgcc
ctgttggcctccggactgggctccatcagacccggttttaccacctcggtgacccccagc
acgccagcccccgtcaagacagagactcaggagagctttctgacgagtcaggactcggtg
gaactcgcccagaaaatgaagaaggagctgctggagcaactggaagaactgtctgaggat
ctgcctcccaacacgctcgatgagttgatcgatgaactgggggggccggaaaacgtggct
gagatgactggacgtaaaggtcgagtggtcagcaacgacgacggcagcatcacgtatgaa
actcgctccgagctggacgttccggtggaaatccttaacctcacagaaaagcagcgcttc
atggatggagaaaagaacatcgccatcatctcagaagctgccagctcaggaatctccctg
caggccgatcggcgagtgcagaaccagcggaggagagttcacatgactctggagctgccg
tggagcgccgacagagctattcagcagtttgggagaacgcaccggtcaaaccaggtcaca
gctccagaatatgttttcctcatatccaagcttgcaggagagcagaggtttgcatcgatt
gtcgccaaacgactagaaagtctgggagctctcactcatggagacagacgggccacagaa
actcgagacctcagcaggttcaacttcgacaacaaatacggcagaaacgctctggagatc
gtcatgaagtcgatcgtaaagctcgactgtcctttagtgtctccaccttcggactttaaa
ggggattttttcaaagagattcagggcgggttgataggcgtgggtctcatcaacgtggag
gaccgctccggggtgctgtctctggacaaagactacaacaacatggggaagttcctgaac
cgtattctgggcatggaggtccaccagcagaacgccttgtttcagtacttttctgacacg
ctggctgccgtcatccaggaggccaagaagaacggccgatacgacatgggcatcctggac
ctggggtccggtgatgagaaggtgaagaagcttgactgtagaaagttcctgacgccgggg
tacaccgcgtcaggacacgtggaactctacaccgtcggtgtggagagaggaatgtcttgg
gaagaagccactcatgcctgggccgaacagaacggaccggacgacggcttctatgtgcag
ctgaggaacaacaagaagacgtccatcctgatcaaagaggtgaacaccaagaagaggctg
ttcctggtctacaggcccaacacgggccggcagctcaaactggagacgtacgcagacatc
aagaagaagtttaaaaaggtgttgtcagaagatgcaaagcagcactggactgaccagtac
cagtcttcagggaaaatctgctctcatgcatactggcgtgggaactgtaagaaagcctcg
ctgggtttgatgtgtgaagtgggtctccggtgcagaacgtactacgttctgtgcggctcc
gtgctcagcgtgtggaacgagctggaagaagtgctttctccggtcagtggaaccaacgtg
aaggtgcagatcgtccgtctcagaacagaagatggacagaggatcgttggactgatcatt
ccggcgaactgcgtgtctccgttactgaacaagttgtccacgtcggaccagagccagcag
ctggccgtgcaggagcagcacaagaggcagcagctccatcctcagagcctcagccacgct
ccggtccctgcgctgtcctcctga
DBGET
integrated database retrieval system
