Nematolebias whitei (Rio pearlfish): 119430789
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Entry
119430789 CDS
T08042
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nwh03041
]
119430789
Spliceosome [BR:
nwh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119430789
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
DUF3182
RRM_5
Motif
Other DBs
NCBI-GeneID:
119430789
NCBI-ProteinID:
XP_037554191
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All DBs
Position
3:41578515..41706765
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AA seq
458 aa
AA seq
DB search
MLMSTDVASIMLPVSRALMDRELDSAMAGGVHPNAGGASAAVRGMKRGDPEPDGQAAAAL
LDSTGAECKRPRMDGSGGLGEVGQNNDPLTLGYHGYASHSQGSQDSAGGQEGLVPPPFSA
FPPPPPPPPQNGLALDYGSSLYAAGAVQGPVEAGGAGNSAANPANSLSVQSDGSSQIESG
VGSGGGGGGGGPGEDSDAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERG
SKGFGFVTFELGSDAERAREKLHGTLVEGRKIEVNNATARVMTNKKMTTPYSNGEGIAAL
PYAGWKLSPMVGAMYSPELYTVPGFPYPAAAAAAAAATTAATFRGTHLRGRARPVYSAVR
AAVPQPAIPTYPGVMAYQDGFYSAAELYGGYAAYRYAQPTAVATPAAAAAAAAAAAYSDS
YGRVYTADPYHAALAPAAYGVGAMATLYRGGYSRFAPY
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgtcgcatccatcatgctgcctgtgtcccgggctctcatggac
cgggagctggacagcgccatggccggcggggtgcatcccaacgcgggcggtgcttccgca
gccgtgcggggcatgaagcgaggagacccggagcccgacgggcaggcggcggccgcgctg
ctggactccaccggggcagagtgcaagaggccccgcatggacggctcgggagggctcggt
gaggtgggacagaacaatgatcctttgacccttggttaccatggatacgcgtctcacagc
cagggctctcaggatagtgctggcggtcaggagggactcgtgcccccacctttctctgcg
ttcccaccacctccaccgccgccccctcagaacggcctggccctggattacgggagcagc
ctgtatgcagcaggggccgtgcagggccccgtggaagccggtggagccggaaacagcgca
gccaatcctgctaacagcctcagtgtccaatcagatgggtcctcacagatcgagtctgga
gtgggctcaggtggagggggcggtggtgggggtcccggggaagattcagatgccaagggg
acccccaaacgtctccatgtgtctaacatccccttccgcttccgagaccctgacctgcgg
cagatgtttgggcaattcggcaaaatccttgacgtggagatcatcttcaacgagaggggt
tccaagggctttggttttgtcaccttcgagttgggttcggatgcagagcgggccagagag
aagctccacggcacgctggtggagggacgtaagatcgaggtcaataacgccacagccaga
gtgatgacaaacaagaagatgaccacgccgtactctaacggggagggcatcgccgcactg
ccatacgctggttggaagttgagccccatggttggagccatgtacagtcctgagctctat
acagttccaggctttccttaccccgcagcagcagcagcagctgccgccgccaccacagct
gcaacctttcgaggcactcacctccgaggtcgagctcggcccgtctacagcgctgtcagg
gcagctgtcccgcaacctgccatccccacgtaccccggcgtaatggcctatcaggatggt
ttttacagtgcggccgagctctacggtggctatgcagcgtatcgttacgcccagccaact
gctgtagcgactcctgcagcagcagcagccgccgccgccgccgcagcgtacagtgacagc
tatggacgagtttacacggcagacccctaccatgctgctctcgcccctgctgcctacggt
gttggagccatggccacgctgtacaggggaggctacagtagatttgccccttactaa
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