Nocardia wallacei: NWFMUON74_06820
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Entry
NWFMUON74_06820 CDS
T07034
Name
(GenBank) putative ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
nwl
Nocardia wallacei
Pathway
nwl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nwl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NWFMUON74_06820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwl03400
]
NWFMUON74_06820
Enzymes [BR:
nwl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
NWFMUON74_06820
DNA repair and recombination proteins [BR:
nwl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
NWFMUON74_06820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
BCK52910
UniProt:
A0A7G1KD92
LinkDB
All DBs
Position
complement(734219..736477)
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AA seq
752 aa
AA seq
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MVSRRRFGSIEVELSNLDKVLYPATGTTKGEVIDYYTAIAPALLPHIAGRPVTRKRWPNG
VAEPSFFEKNLASHAPGWLQRQTVEHSDRHVTYPVLDSVAGLAWLGQQAALEIHVPQWRF
VRGERGPATRLVFDLDPGPGVGLDECARVALWIRETVRDAGLDAYPVTSGSKGIHIYVPL
DRELTPSGASTVAKQLATGLEKLHPELVTATMAKAARPGKIFLDWSQNNPSKTTIAPYSL
RGRTHPTVAAPRTWAEIEDRKRLRHLTFDEVLARWRDNGDVLSGLDPPLAEQATDPLSTY
RSMRDPARTPEPVPAGPPGSGADNRFVIQEHHARRLHWDVRLERGGVLVSWAVPKGPPTT
PKENRLAVHTEDHPLEYLDFHGTIPKGEYGGGEMTIWDTGTYETEKWREDEVIVHLHGSR
LDGRYAFIQTNGNQWLMHLMKSEAPAQQPLPNGKPKPPTQFPHGLTPMLATTGDVSVLDT
DEWSFETKWDGFRLIAEIEDGKVTLRSRAGNTVTGRYPRLAALGRELDGHRAVLDGEAVV
FDDHGVANLGLLQADAARAVFVAFDVLYLDGTSLLRKRYSDRRRVLEALAGRAPSLVVPP
QLDGPGAAALRYSQEHGLEGVIAKRKDSVYLPGKRGQSWVKSRNWRTQQVVIGGWRRSEA
RQFASLLVGVHHEGRLFYVGRVGTGFSEQEMSELATQLRRLQRKTSPFDNDLTPEERKDA
VWATPNLTGTVRYMNWTEAGRMWHPAWIPATD
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcccgccgccggttcgggagtatcgaggttgagctgtccaacctcgacaaggtg
ctgtaccccgccaccggcaccaccaagggcgaggtcatcgactactacaccgccatcgcc
cccgcgttgctgccgcacatcgccgggcggccggtcacccgcaaacgctggcccaacggg
gtcgccgagccctcgttcttcgagaagaatctggcctcgcacgcacccggctggctccag
cggcagacggtcgagcattccgatcgccacgtcacctacccggtgctggactcggtggcc
gggctggcgtggctcggacagcaggccgcgctggaaatccatgtgccgcaatggcgtttc
gtgcggggcgagcgcggtccggccacccgcctggtgttcgatctcgatccgggccccggc
gtcgggctcgacgaatgcgcccgcgtcgcgctgtggatccgcgagacggtacgcgacgcc
gggctggacgcctacccggtcaccagcggcagcaagggcatccacatctacgtcccgctg
gaccgggaactcaccccgagcggcgcgtcgacggtggccaagcaactcgccacgggcctg
gagaaactccatcccgagctggtcacggccaccatggccaaggccgcgcggccgggcaag
atcttcctggactggagccagaacaatccgtccaagaccaccatcgccccgtattcgctg
cgcggccgcacccatccgacggtcgccgcaccgcgcacctgggcggagatcgaggaccgt
aaacgcctgcggcacttgaccttcgacgaggtcctggctcgctggcgggacaacggcgat
gtgctgtccggcctggatcccccgctggcggagcaggccaccgacccgctctccacctac
cgatccatgcgcgacccggcccgcacacccgagcccgtacccgccgggccgcccggctcg
ggcgcggacaaccggttcgtgattcaggagcatcacgcccgccgcctgcactgggatgtg
cggctggagcgcggcggcgtgctggtgtcgtgggcggtgccgaagggcccgcccaccacg
ccgaaggagaaccgcctggccgtacacaccgaggatcacccgctggagtacctcgatttc
cacggcaccatcccgaaaggcgagtacggcggcggcgagatgacgatctgggacacgggc
acctacgagaccgagaagtggcgcgaggacgaggtgatcgtgcacctgcacggctcccgc
ctcgacggtcgctacgccttcatccagaccaacggcaaccagtggctcatgcacctgatg
aagtcggaagctcctgcgcagcaaccacttccgaatggcaaaccgaaaccgcccacgcag
ttcccgcacggcctgaccccgatgctggccaccaccggcgacgtctccgtcctcgacacc
gacgagtggtcgttcgagacgaaatgggacggcttccggctgatcgccgagatcgaggac
ggcaaggtcaccctgcgcagccgcgcgggcaatacggtcaccggccgctatccgcgcctg
gccgccctgggccgcgaactcgacggtcatcgcgccgtactggacggcgaggcggtggtc
ttcgacgatcacggcgtcgcgaatctcggcctgctgcaagcggatgccgcccgcgcggtg
ttcgtggccttcgacgtgctgtacctggacggcacctcgctgctgcgcaagcgctactcc
gaccggcggcgggtcctggaggcgctggccggtcgcgccccgtcgctggtggtgcccccg
caactggacggccccggcgcggcggcgctgcgctacagccaggagcacgggctggagggc
gtgatcgccaagcgcaaggattcggtgtacctgccgggcaagcgcgggcagtcctgggtc
aagtcccgcaactggcgcacccagcaggtggtgatcggcggctggcggcgcagcgaggcg
cggcagttcgcctcgctgctggtcggcgtccaccacgagggcagactgttttacgtgggc
cgcgtcggcaccggcttcagcgagcaggagatgtccgagctggcaacacaattgcgccgt
ctgcaacgcaagaccagcccgttcgacaacgacctcacccccgaggaacgcaaggacgcg
gtctgggccaccccgaacctcaccggcaccgtccgctacatgaactggaccgaggcgggg
cgcatgtggcacccggcgtggattcccgccaccgactga
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