Niabella yanshanensis: U0035_11505
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Entry
U0035_11505 CDS
T09723
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
nyn
Niabella yanshanensis
Pathway
nyn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nyn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U0035_11505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nyn03021
]
U0035_11505
Transcription machinery [BR:
nyn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
U0035_11505
BRITE hierarchy
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_40
HTH_23
HTH_20
HTH_28
HTH_24
HTH_10
TnsD
HTH_11
DUF6674
HTH_Tnp_ISL3
HTH_38
HTH_36
HTH_7
UPF0122
HTH_Mga
PCI
Xre-like-HTH
RPA_C
Motif
Other DBs
NCBI-ProteinID:
WQD36289
LinkDB
All DBs
Position
complement(2782660..2783226)
Genome browser
AA seq
188 aa
AA seq
DB search
MSAIADIQAGDPFVFEQVYEEYYLKLYHFVLGKTRSEWLAEEVTQTTFVKLWENRQRLNP
EIALSLQVFRIARTTMIDYIRKQNHLSFALTQLKSKPEAAANELDAKIDYNETNRKLAKA
LTELPEMRRKVFELSRLEGMSYKDIAEQLSISVKTVEKHISKALQQLRPLLYGILLIGWI
LRNFIKNI
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgctatagctgatatacaggcaggtgatccttttgtttttgaacaggtatacgaa
gagtattacctgaagctgtatcattttgtattggggaaaacaagatcggaatggctggcg
gaagaagtaacgcaaaccacatttgtgaagctttgggaaaacaggcagcggctgaacccc
gaaatagcgctctcactacaggtgttcaggattgcacgaacgacgatgatcgattatatc
aggaagcagaaccacctcagttttgccttaacgcaattaaaaagtaaaccggaagcagca
gcaaatgaactggatgccaagatagattataatgagaccaaccggaaactggcaaaggca
ttaacagagctacctgaaatgagaaggaaggtttttgagctcagtcgcctggagggaatg
agttataaagatattgcggagcagttgtccatttcggtaaaaacggtggaaaagcatatt
tcaaaagcccttcagcaattgaggccgcttttgtatggtatattacttatcggctggatc
ttaagaaattttataaaaaatatataa
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