Neisseria zoodegmatis: SAMEA4504057_1719
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Entry
SAMEA4504057_1719 CDS
T06683
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nzo
Neisseria zoodegmatis
Pathway
nzo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nzo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMEA4504057_1719 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nzo03019
]
SAMEA4504057_1719 (pnp)
03016 Transfer RNA biogenesis [BR:
nzo03016
]
SAMEA4504057_1719 (pnp)
Enzymes [BR:
nzo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SAMEA4504057_1719 (pnp)
Messenger RNA biogenesis [BR:
nzo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SAMEA4504057_1719 (pnp)
Transfer RNA biogenesis [BR:
nzo03016
]
Prokaryotic type
tRNA degradation factors
SAMEA4504057_1719 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
DUF5813
KhpA-B_KH
DUF6033
Motif
Other DBs
NCBI-ProteinID:
SNU80206
LinkDB
All DBs
Position
1:1857696..1859834
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AA seq
712 aa
AA seq
DB search
MFNKHVKSFQYGEHTVTLETGEIARQAAAAVKVSMGDTVVLVAVTANKDVKEGQDFFPLT
VDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPLFPEGFYHDIQIVAMVVSV
DPEIDSDIPAMIGASAALVLSGVPFAGPIGAARVGYVNNVYVLNPTKAQLAKSQMDLVVA
GTQKAVLMVESEAQELPEHVMLGAVVYGHEQMQAVINAINEFADEVNPEVWDWKAPETNE
ELVAKVRGISGTTIAEAFKIRQKQARSAKLDEAWNAVKDALITEETDTLTANEIKGIFKQ
LEADVVRGQILDGQPRIDGRDTRTVRPINIQTGVLPRTHGSALFTRGETQALAVATLGTQ
RDEQIIDALSGEYTDRFMLHYNFPPYSTGEVGRMGAPKRREIGHGRLAKRALVAVLPSPE
EFSYTMRVVSEITESNGSSSMASVCGGCLSLLSAGVPLKAHVAGIAMGLILENNKFAVLT
DILGDEDHLGDMDFKVAGTTEGVTALQMDIKIQGITKEIMQIALEQAKEARLHILAQMKE
AVEGPQELSQHAPRLFTIKIHPDKIRDVIGKGGETIRGITAQTGTEINIADDGTVTIAAT
TQEAGDAAKKRIEEITAEVEVGKVYDGTVLKLLDNNVGAIVSVIPGKDGLVHISQIAHER
VKNVSDYLQVGQNVKVKALEVDDRGRVRLSMKALIEAPEREPRQEQQADGES
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaacacgttaaatctttccaatacggcgagcacaccgttaccctcgaaacc
ggcgaaatcgcccgccaagccgcggcggccgtgaaagtttctatgggcgacactgtggtt
ttggtggccgttaccgccaataaagacgttaaagaaggccaagactttttcccgctgacg
gttgattatctcgagcgcacttatgctgcgggtaaaatccccggcggtttcttcaaacgc
gaaggcaagcaaagcgaaaaagaaatcctcaccagccgcttgatcgaccgccccatccgc
ccgctgttccccgaaggtttctaccacgacattcaaatcgtagcgatggttgtttccgtt
gaccccgaaatcgactccgacatccccgccatgatcggtgcttctgctgcgctggtgttg
agcggcgtgccgtttgcaggcccgatcggtgccgcacgcgtgggttatgtgaacaatgtt
tacgtgctgaacccgaccaaagcgcaactggctaaatcgcaaatggatttggtggttgcc
ggcacgcaaaaagccgtgctgatggtcgaatccgaagcgcaagagctgcccgagcacgtg
atgttgggcgcggtggtttacggccacgagcaaatgcaggccgtaattaacgctatcaat
gaatttgccgacgaagtcaaccccgaagtttgggattggaaagcaccggaaaccaacgaa
gaattggtggccaaagttcgtggaatttccggcaccacgattgccgaagcgttcaaaatc
cgccaaaaacaagcccgttccgccaaattggacgaagcttggaatgcggttaaagatgcg
ttgattaccgaagaaaccgacacgctcaccgccaacgaaatcaaaggcattttcaaacaa
ctggaagccgacgtggtgcgcggtcagattttggacggccaaccgcgtatcgacggccgc
gacacccgcaccgtgcgcccgatcaacatccaaaccggcgtattgccgcgcacccacggt
tccgccctgtttacccgcggcgaaacccaagctttggcagtagccactttgggcacccag
cgcgacgagcaaatcattgatgccttgagcggcgaatacaccgaccgcttcatgctgcac
tacaacttcccgccatactctaccggcgaagtgggccgcatgggtgcgccgaaacgccgc
gaaatcggccatggccgcttggccaaacgcgcgctggttgccgtgttgccttcgccggaa
gaattcagctacaccatgcgcgtggtttccgaaattaccgagtctaacggttcgtcttcg
atggcttccgtgtgcggcggctgtttgagcctgctgtctgccggtgtgccgctgaaagca
cacgttgccggtatcgccatgggcttgattttggaaaacaacaaattcgccgtgttaacc
gacattttgggcgacgaagaccacttgggcgatatggactttaaagtagccggcaccacc
gaaggcgttaccgcgctgcaaatggatattaagattcaaggcattaccaaagaaatcatg
cagattgctttggagcaggccaaagaagcgcgtctgcacattctggcgcaaatgaaagaa
gccgttgaaggcccgcaagagctgtctcaacacgctccgcgcctgtttaccatcaaaatc
catcccgacaaaatccgtgatgtgatcggtaaaggcggcgaaaccatccgcggcattacc
gcgcaaaccggcaccgaaatcaatatcgccgacgacggcacggtaaccattgccgccacc
actcaagaagcgggcgatgcggcgaaaaaacgcatcgaagaaatcaccgccgaagtggaa
gtgggcaaagtgtacgacggcacggtattgaagctgctcgacaacaacgtcggcgccatc
gtttccgtgattccgggcaaagacggcttggtacacatcagccaaatcgcccacgagcgc
gtgaaaaacgtgagcgactacctgcaagtcggccaaaacgtgaaagtgaaagcattggaa
gtggacgaccgcggccgcgtgcgcctgtcgatgaaagccttgatcgaagcgcccgaacgc
gaaccgcgccaagagcaacaggctgacggcgagtcgtaa
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