KEGG   Nitrosopumilus zosterae: NZOSNM25_000837
Entry
NZOSNM25_000837   CDS       T08647                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
nzt  Nitrosopumilus zosterae
Pathway
nzt03030  DNA replication
nzt03410  Base excision repair
nzt03420  Nucleotide excision repair
nzt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nzt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NZOSNM25_000837
   03410 Base excision repair
    NZOSNM25_000837
   03420 Nucleotide excision repair
    NZOSNM25_000837
   03430 Mismatch repair
    NZOSNM25_000837
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nzt03032]
    NZOSNM25_000837
   03400 DNA repair and recombination proteins [BR:nzt03400]
    NZOSNM25_000837
Enzymes [BR:nzt01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     NZOSNM25_000837
    6.5.1.6  DNA ligase (ATP or NAD+)
     NZOSNM25_000837
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     NZOSNM25_000837
DNA replication proteins [BR:nzt03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    NZOSNM25_000837
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     NZOSNM25_000837
DNA repair and recombination proteins [BR:nzt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     NZOSNM25_000837
   NER (nucleotide excision repair)
    Other NER factors
     NZOSNM25_000837
   MMR (mismatch excision repair)
    Other MMR factors
     NZOSNM25_000837
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: BDQ30731
LinkDB
Position
complement(712130..713860)
AA seq 576 aa
MESTRKRLELTQFLVELFENTPHDIISKIVYLLQGKLRPDFEGIELGVAEKLAIRAISKS
SGIPIKKIEDEYRKGGDLGQAASIILEQKTQTTFLVEDITIERVYETLFKIAKLEGSRSQ
DMKMKYISSLLNDATPLEASYILKILLGTLRLGIAENTVMDALAIAFSGSKENRKSLEHA
YNVSSDLGKVAEIIATKGIEGVEKFEIILFNPIRPMLADRVKSEEEAMEKMGIEFAAEYK
LDGERVQLHIEGEKVVLFSRSLENISSYYPDIIERIPKAVQADNIILEAEAVAMNENTGE
FLPFQELMHRRRKYKIEKAVTQYPISVNLFDVLYCNGKSCLELPYKDRREKLEKVVKEDE
FVKYIPMTTIKNKNEIEDFMENGINAGSEGLMLKMMDKPYQAGSRGNYWLKLKREYQNEL
GDSLDLVVIGGFFGKGRRTGSYGTLLLATYDEDNDTFPSICKVGTGFSDESLDQLYQILH
PKVTIKKNPRIISEMEADVWFEPELVVEVVASEITLSPIHKAAEDKIRKGAGLALRFPKF
TGKIRVEKAAEDASTNEEVITLYRGQKKVAHDKNLI
NT seq 1731 nt   +upstreamnt  +downstreamnt
atggaatcaaccagaaaaagattagagttaacacaattcttagtggaattatttgagaac
acaccacacgacataatttcaaaaattgtgtatctgttacaaggaaaactaagacctgat
tttgaaggcattgagttaggcgttgcagaaaaacttgcaataagggcaatctcaaaatcc
tcaggaataccaatcaaaaaaatcgaggacgaatatagaaaaggaggagacttggggcaa
gcagcatccataatactggaacaaaaaacacaaacaacatttcttgtcgaagacatcaca
atagaaagagtctatgaaacgctattcaaaattgcaaaattagaaggctctcgttctcaa
gacatgaaaatgaaatacatctcaagtttgctaaatgatgcaaccccattagaagcaagt
tacattttgaaaattttgttaggaacgctacgattaggaattgcggaaaacacagtgatg
gatgcattggcaatagcgttttctggaagtaaagaaaatagaaaaagtttagagcacgca
tacaatgtttcaagcgacttgggaaaggttgcagaaataattgcaacaaaaggaattgaa
ggagtagaaaaatttgaaattattttatttaatccaattagacccatgcttgcagacaga
gtaaaaagtgaagaagaagcaatggagaaaatgggaattgagtttgccgcagaatacaaa
ctagacggagaaagagtacaacttcacattgaaggagaaaaagtggtattgttttcaaga
agtttagaaaacatatcaagttattatcccgacatcatagaaagaattcctaaagcagtt
caagctgacaacatcatattggaagcagaagcagtagcaatgaacgaaaacaccggagaa
tttttgccgtttcaagagctaatgcacaggagaagaaaatacaagatagaaaaagctgta
acacaatacccaatttcagtgaatttatttgatgttctatattgcaatggcaaaagctgt
ttagaattaccatacaaagacagaagagagaaattagaaaaagtcgtaaaagaagatgaa
tttgtaaaatacataccaatgaccacaatcaaaaacaaaaacgaaattgaagactttatg
gaaaatggcatcaatgcaggtagcgaaggattgatgctaaagatgatggataaaccatac
caagcaggttccagaggaaattactggttgaagttaaaacgagagtatcaaaacgaatta
ggagacagtttggatctagttgtaataggcgggttttttggaaaaggaagaagaacggga
agttatggaacgttgttgcttgcaacatatgatgaagacaatgatacatttccaagtatt
tgtaaagtgggaacaggattttctgatgaatccttagatcagctgtatcaaatattacat
ccaaaagttacaatcaaaaaaaatccccgcatcattagcgagatggaagcagacgtatgg
tttgaaccagagctagtagtagaagtagtggcatcagaaattacacttagtccaattcac
aaagcagcagaagacaaaattagaaaaggcgcaggacttgcattaagatttccaaaattt
accggaaaaataagagtagaaaaagcagcagaagacgcatcaactaatgaagaagtcatc
acactgtacagagggcaaaaaaaagtggcacatgataagaatttgatttaa

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