Ornithorhynchus anatinus (platypus): 100084171
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Entry
100084171 CDS
T01045
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
100084171 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oaa03400
]
100084171 (LIG4)
Enzymes [BR:
oaa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
100084171 (LIG4)
DNA repair and recombination proteins [BR:
oaa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
100084171 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_A_C
DNA_ligase_IV
BRCT_2
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
100084171
NCBI-ProteinID:
XP_007666847
Ensembl:
ENSOANG00000015936
LinkDB
All DBs
Position
20:complement(10439145..10446668)
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AA seq
908 aa
AA seq
DB search
MTSPQPTVASHVPFADLCSTLERIQRSKTRPEKVKHFKEFLDSWRRFHDALYKKAAGVAD
SFYPAMRLILPQLERERVAYGIKETMLAKLYIELLHLPKDGKDAQKLLNYRAPTGPRGDA
GDFATVAYFVLKQRCPRQGCLTVQQVNDVLDSVASNNSAKRKDLVKKSLLQLITQSSALE
QKWLIRMIIKDLKLGFSQQTVFSLFHRDATELYNVTTDLEKVCRQLHEPSVGLSDISIAL
FSPFKPMLAAIADIQQIEKAMNQRSFYIETKLDGERMQMHKDGDVYKFFSRNGYDYTEQF
GASPREGSLTPFIHGAFRPDLHNCILDGEMMAYSPATRTFTQKGSRFDIKRMEEDSDLQT
CFCVFDVLMVDGKKLGHETLRGRHEILTGVFTPVAGRIEVVPKAPAVTKREVIDALNEAI
DKREEGIMVKDPSSIYKPDKRGEGWLKIKPEYVNGIMDELDLLIVGGYWGKGFRGGMMSH
FLCAVAETPPPGEKPSVFRTLCRVGSGYTMKELYDLGMKLAQHWQPYRKRAPPDCLSCGT
EKPEVYIEPCHSVIVQVKAAEIVGSDMYSTDCTLRFPRIEKIREDKAWHECTTVEELERL
RGRASGKLASRHFPAEDGEPQGKKRRAAPRAKRPLGVVEHRKAPDLAGVRRISDVFEEVE
FCVMSGTGSHPKADLENRIAELGGYVVQNPGPDTYCVIAGTENVRVRNVISSNGHDVVRP
QWLLECFEAKRCLPWQPRFMVHMAPATERHFAREYDRYGDSYFADTSPDQLKELFSGMKD
VPERGLREMAPVIADLEDRYAWDSHPLCLFRRHTVYVDLYAAVGQPGTEVRGTGLATVAL
ELRFHGAIVVARLREGVSHVIVGEDQSRVRELKAFRRTLQKKYKILQDLWVTHSIERGAL
QQESRYLI
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgacttctccacaaccaacggtggcatcccacgtgccctttgccgatctgtgttccacg
ctagaaaggatccagagaagcaaaacccgcccagagaaggtcaagcactttaaggagttt
ttagactcgtggaggagattccacgacgccctttataagaaggcggcgggagtggcggat
tctttttatccagctatgagactgatcctgccgcagctcgagcgagagagagtggcctac
ggcattaaagaaactatgctggccaaactttatatcgagctgctccacctacccaaagac
ggaaaagacgcgcagaagctcttaaactaccgagcgcccaccgggcctcggggggatgcc
ggcgactttgccaccgtcgcctatttcgtgctgaagcagaggtgccccagacagggctgc
ctgaccgtccagcaggtaaacgacgtgctggactccgtcgccagcaacaactccgccaaa
aggaaggacctggtcaagaagagcctccttcaactgataacccagagttccgctctcgag
cagaagtggctgatccggatgatcatcaaggacttgaaactgggcttcagccagcagacc
gtattctccctcttccaccgagatgccaccgaactgtacaacgtcaccaccgacctggaa
aaagtgtgcaggcagctgcacgagccctccgtggggctcagcgacatctccattgccttg
ttctcgcccttcaagccgatgctggcggccattgcggacatccagcagatcgagaaggcc
atgaaccagaggagcttctacatagagaccaagctagacggggaacgcatgcagatgcac
aaagacggggacgtctacaagtttttctcccgcaacggctacgattacacggagcagttc
ggcgcctctccccgcgagggctccttaacacccttcatccacggggccttccggcccgac
ctccacaactgcatcctggacggcgagatgatggcctacagtccggccacccgcactttc
acgcagaagggaagcaggttcgacatcaagaggatggaagaagattccgacctgcagacg
tgtttctgcgtcttcgacgtcctgatggtggacggcaagaagctgggccacgagaccctg
cgcggacggcacgagattctcaccggcgtcttcaccccggtggcggggcggatcgaagtg
gtgccgaaagcgccggccgtcaccaagagggaagtgatcgacgcgctgaacgaagccatc
gacaagcgggaagaggggatcatggtgaaggatccctcgtccatttacaagccggacaaa
cgcggggaagggtggctgaagatcaagccggagtacgtgaatgggatcatggacgagctg
gaccttctgatcgtcggcgggtactgggggaaaggcttccggggcgggatgatgtctcac
ttcctttgtgcggtggcggagacgcccccgccgggcgagaagccctccgtgtttcgcacc
ctgtgccgggtcggctccggctacaccatgaaagaactgtacgacctgggcatgaagctg
gcccaacactggcagccctatcggaagagagctccccccgactgcctctcctgcgggacg
gagaagcccgaggtctacatcgagccctgccactcggtcatcgtccaggtgaaggccgcg
gagatcgtcggcagcgacatgtacagcacggactgcacgctgcgcttccctcggatcgag
aagatccgggaggacaaagcgtggcatgagtgcacgaccgtggaagagctggaacggctc
cgcggcagggcctccgggaagctggcctccaggcacttccccgccgaggacggggagccg
caggggaagaagcggagggctgccccgagggccaagaggccgctcggggtcgtcgagcac
cggaaggccccggacctggccggcgtccgccggatctcggacgtcttcgaggaggtggag
ttctgcgtcatgagcgggacgggcagccacccgaaggccgacctggagaaccggatagcg
gagctgggcgggtacgtggtgcagaacccggggccggacacctactgcgtcatcgccggc
accgagaacgtcagggtgaggaacgtcatctcctccaacgggcacgacgtggtcaggccc
cagtggctcctggagtgcttcgaggccaagcggtgtctgccttggcagccgcgcttcatg
gtccacatggctccggctacggagcggcactttgcccgcgagtacgaccgctacggggac
agctatttcgccgacaccagcccggaccagctgaaggaactcttttcgggaatgaaagac
gtcccggagcgggggctccgggaaatggcccccgtgatcgccgacttggaagaccgctac
gcgtgggacagccaccccctctgcctgttccgacgccacacggtctacgtggacctttac
gctgccgtcggccagcccggcaccgaggtccgggggacggggctggccaccgtggccttg
gaactgcggttccacggcgcgatcgtcgttgcccgtctgcgagaaggggtctcccacgtg
atcgtcggggaagaccagagccgagtcagggaacttaaggccttccggaggaccctccag
aaaaaatacaaaatcctccaggacctgtgggtgacacactccatagagaggggcgcgtta
cagcaggaatcccggtacttgatttaa
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integrated database retrieval system
