Oxalobacter aliiformigenes: NB647_06755
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Entry
NB647_06755 CDS
T08749
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
oal
Oxalobacter aliiformigenes
Pathway
oal03410
Base excision repair
oal03430
Mismatch repair
oal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NB647_06755 (recJ)
03430 Mismatch repair
NB647_06755 (recJ)
03440 Homologous recombination
NB647_06755 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oal03400
]
NB647_06755 (recJ)
DNA repair and recombination proteins [BR:
oal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NB647_06755 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NB647_06755 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NB647_06755 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
WAV88597
LinkDB
All DBs
Position
complement(1465697..1467394)
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AA seq
565 aa
AA seq
DB search
MTRIAVRPYSLQSFRHLHDAGIHPVLARIFAARGISEPAELSTGLSGMIPPKQLLNIGKA
AVFLADAIAGGRKMTVIADYDCDGATACAVALRGLKLMGARVDFMVPSRFDNGYGLTPAI
VDEAKKNHGTEVLVTVDNGIASLEGIGRAVALGMEVLVTDHHLPGDELPKNCIVVNPNQP
GCPFPSKHLAGVGVMFYVLLALRAEMRLRHVFDESTQPRLDHLLDLVALGTFADVVRLDA
NNRILVAQGLRRIRSGIMQPGVAALFMVSGRDCRKASPFDLGFALGPRLNAAGRLSDMAL
GIECLLTDDASRALQMAEELNRINTERREIEADMRLEAREKIARFQPENRATICVLSEDW
HQGIIGILASRIKEKYFRPTMAFAAGKDGRLRGSGRSIPEFHMRDALDLIAKRHPGLIVQ
FGGHAMAAGLTLKADGFEVFSEAFEAVAKDWLTQTQLERLVETDGSLDDDCFSLDFIHLL
DAQVWGHGFPPPLFCDEFTVLNQRILKDRHLKLQLEKNGRHFDAIQFGSTTMLPRCARLA
YRLDANEYNGRTSVQLLVEHAEDPK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaattgccgtccgtccctattccctgcagagtttccggcatttgcacgatgcc
ggtatacatcccgttttagcgcggatttttgcggcacggggtatatccgaaccggctgaa
ctgtctaccggactctccggcatgatcccgccgaaacagttgctcaatattggcaaggcg
gccgtttttctggccgatgcaattgccggtggccggaaaatgacagttatcgcggattac
gattgcgatggtgccacagcctgtgccgttgcgcttcgcggattgaaactgatgggcgcc
cgtgtcgatttcatggtaccgagccgtttcgataacggatacggattgacgccggccatt
gtggatgaagcgaaaaaaaatcacggaacggaagtgctggttaccgtcgataacggtatc
gccagtctggaagggatcgggcgggctgtagcgctggggatggaagtactggtgaccgat
catcacttgccgggcgatgaattgccgaagaactgcattgtcgtcaatcccaaccagccc
ggctgcccttttcccagcaagcatctggccggggtcggtgtcatgttttatgtccttctg
gcactgagagccgaaatgcggctgcggcatgtcttcgatgaaagtacccagccgcgtctg
gatcatttgctcgatctggtggcgctgggcacgtttgccgatgtggtccggctcgatgcc
aataaccggattctggtggcacagggattgcgtcgtatccgttcgggaatcatgcaaccg
ggggtcgcggccctgtttatggtttcaggcagggattgccggaaggcttctcctttcgat
ctcgggtttgcgctggggccaaggctgaatgccgccggccgtctgtcggatatggcactg
gggatcgaatgtcttctgacggatgatgcatcccgtgcattgcagatggcggaggaactg
aaccggatcaataccgagcggcgggaaatcgaggcggacatgcgcctggaagccagggaa
aaaatcgcccggttccagccggaaaaccgggcgacgatttgtgttctgtccgaagactgg
catcagggcatcatcggtattctggcgtcccgtatcaaggaaaaatatttccggccgacg
atggcattcgctgccggcaaggatggcagactgagaggatcgggccgttccattccggaa
tttcacatgcgtgatgcactggatctgatcgccaagcggcatcctggcctgattgtccag
ttcggagggcatgccatggcggcgggtctgacgctaaaagcggatggattcgaggttttt
tccgaagcgttcgaggcggtggcaaaggactggctgacccagacgcaactggaaagactg
gtcgaaacggacggttctcttgacgatgactgtttcagtctggatttcatccacttgctg
gatgcccaggtttggggacacggatttccgcctcccctgttttgcgacgaattcaccgta
ttgaaccagcgcattctcaaagaccgccacctgaaactgcaactggaaaaaaacggtcgt
cacttcgacgctatccagttcggcagtacgaccatgctgccccgttgcgcccggctggca
taccggctggatgccaatgaatataatggcaggacgtccgttcagcttcttgtcgaacat
gccgaagacccgaaatga
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