Brucella anthropi ATCC 49188: Oant_4315
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Entry
Oant_4315 CDS
T00568
Name
(GenBank) DNA ligase D
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
oan
Brucella anthropi ATCC 49188
Pathway
oan03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
oan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Oant_4315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oan03400
]
Oant_4315
Enzymes [BR:
oan01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
Oant_4315
DNA repair and recombination proteins [BR:
oan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Oant_4315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
DNA_primase_S
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
ABS17015
UniProt:
A6X711
LinkDB
All DBs
Position
2:complement(1741498..1744002)
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AA seq
834 aa
AA seq
DB search
MGQSLETYRRKRDFTLTNEPRGKSSRTKRELFVVQKHDARRLHYDFRLEMDGVLKSWAVT
RGPSLVPGEKRLAVHVEDHPLEYADFEGTIPKGKYGGGTVIVWDTGRWKSTADAHQQYKK
GHLEFELTGEKLKGRWHLIRMHGKPDEKRENWLLIKGEDEFSRNPDEPDILVEMPKSVKT
GRAIADVEHEAPGWSSKTGSINKKSNAQGDGGGANIKNAKKRPMPSFVKPELATLVSVAP
DGNRWLHEIKFDGYRIQAHIAGGKVALYSRGGLDWTEKFGQQIARDLVGTSVNEAIFDGE
IVVESQSGLSDFSALQEDLREGRSDRFVYYLFDLLHVDGKDLRQTPLVERKTLLEKLISA
SSSTLRFSEAFDADGAAVLKNACGLGLEGIVSKLREASYRSGRSNDWRKSKCIGRQEFVI
AGYVPSTVTRAAIGSLLLGVQDKKGLVPVGRVGTGFSVRIAKELYKRLQAMRQGGSPFAV
PLTADERRGAKFVTPLLVAEIEFRAWTADKRLRHASFRGVRDDKAAKDVIWEKQTMSPRI
SSKGPEEIDVKLTHPDRVYWPGEGVTKQGLADYYSAIWSSIEPFIVNRPLALLRCPTGID
GEHFFQRHAWKGLNEHIIEVQDPENKEEEPYISIRDFNGLIGLVQAATLEIHPWGSTLKN
WELPDTLTMDLDPGEGVPWSRVIEAAIETKERLEKLGLKTFVKTSGGKGLHVVAPLKPKV
DWDALKSFTKAIADQMAADSPDRYVSTISKAKRKGKILIDYLRNQRGMTAVAPYSPRARP
GAAVSMPLGWDEVTSAIGPAHFTIVNTPNRLAALNSDPWQDFRSAETPLPKLKK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgggacagtcactcgaaacctatcgcaggaaacgcgattttaccctgactaacgagccg
cgcggtaagtcttcgcgcacaaaacgcgagctctttgtcgtgcaaaaacatgatgctcgc
agactgcattatgattttcgccttgagatggatggcgtgctgaaaagttgggctgtgacg
cgaggtccaagccttgttcctggcgaaaagcgactggccgtgcatgtggaggaccatccg
cttgaatatgcggacttcgaaggcacgatccctaaaggcaagtacggtggtggtacagtt
atcgtctgggatacagggcgttggaaatccactgctgatgcacatcagcaatacaagaaa
gggcatcttgagttcgagctcacaggggaaaaactcaaaggtcgctggcatttgatccgg
atgcacggaaagccagacgagaagcgagagaattggctcctcatcaagggggaggacgaa
ttttccagaaatcctgatgaacctgacattcttgtagagatgccgaaatcggtaaaaacc
ggccgcgccatcgccgatgtcgaacacgaagcgccaggatggtcatcgaaaactggttcg
atcaacaaaaagtcgaacgctcaaggggatggtgggggcgcaaatatcaaaaatgcgaag
aagcgaccgatgccgagtttcgtcaaacctgagctcgctacgctcgtatcagttgctcca
gatggaaaccgctggcttcacgagatcaagttcgacggttatcgcatccaggctcatatt
gcggggggcaaggtcgccctttattcgcgtgggggactggattggactgaaaaatttggc
cagcagattgccagagatcttgttggtacgagcgtgaacgaagccatatttgatggggag
atcgttgtcgaaagccagtcgggactgtctgacttttcagctttgcaagaggatctaagg
gagggacgttctgatcgattcgtttattaccttttcgatctactgcatgttgatggcaaa
gaccttcgccagacgcctctggttgagcgcaaaacgctgctcgaaaaattaatttctgca
tcatcgtcaacacttcgcttcagcgaggcctttgatgccgatggggctgcggtactgaag
aatgcctgcggacttggccttgagggcattgtgtcgaagctcagggaggcatcttataga
agcggtcgcagcaacgattggcgtaagtcgaaatgcattggacgacaggaattcgtcatt
gcaggctatgttccgtcgacggtaacgcgagcggcaatcggttcgctccttttgggtgta
caggataagaaggggctggttcccgtaggccgggtgggaacaggcttttcggtcaggatt
gcaaaagaactttacaaacggctgcaagccatgcggcagggagggagcccattcgccgtg
ccgctgacggcagatgaaaggcgcggagccaagttcgttacaccgctgctggtagcggaa
atcgaatttcgtgcctggactgccgataagcgattgcgtcacgcgtccttcaggggggta
cgagacgataaggctgccaaggacgtcatatgggagaagcaaaccatgtcaccccgtatt
tccagtaaaggccccgaggagatcgacgtgaagctcacacatcccgaccgggtttactgg
ccgggcgaaggtgtcacaaaacagggtctcgcagattattattccgctatctggtccagc
atcgaacctttcatcgtcaaccgccccctggcattgttacgctgcccaaccggaattgac
ggagaacacttctttcaaaggcacgcgtggaaggggttgaatgaacatattatcgaagtt
caagatccagagaacaaggaagaggagccttatatcagcattcgggacttcaacgggctg
atcggtctggtgcaagccgcgacgctggaaattcacccctggggttctacgctcaaaaat
tgggagctaccggatacgttgacaatggatctcgatccgggtgagggcgttccatggtcg
cgcgtgatcgaagccgcaatcgagaccaaggaacgtctggaaaaactcggattgaagacg
tttgttaaaacgtccggtggcaagggactacatgtggtcgcgccattgaagccgaaggtc
gactgggacgccctcaagagctttacaaaggctattgccgaccagatggctgcagacagt
cctgatcgctatgtttcgacgatttccaaggccaagcgcaaaggcaaaattcttattgat
tatctgcgcaatcagcgcggcatgactgctgtagcaccctattcgccgcgggcacgtcct
ggtgctgcagtttccatgccgcttgggtgggacgaagtgacgtcagcaataggccccgcc
cattttactattgtcaacacgccgaaccggctggccgcattgaatagcgatccctggcag
gattttcgcagcgcggaaacgccgctgcctaagctgaagaaatag
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