Oreochromis aureus (blue tilapia): 116309260
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Entry
116309260 CDS
T07295
Symbol
frem1a
Name
(RefSeq) FRAS1-related extracellular matrix protein 1a isoform X2
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116309260 (frem1a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
116309260
NCBI-ProteinID:
XP_031581682
LinkDB
All DBs
Position
LG3:complement(2228496..2253685)
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AA seq
2178 aa
AA seq
DB search
MGSPVQLLAWMCLPLLLVVHCASHGSLVKVNKGLKVKRGQSAYLHVEDLQFHIPHQKDSC
KLEVVMNEPITQRVGKLLPQVFDCDYLADEVKYVHNGCPLLKEDTVKLRLYRFTETETYM
EVFSIHVEIMEPECTIIRLGPKSLEVPEFYSLSNAVDGNVVSFHYERRSSLECSIHLNSH
DTHLPTHGQLVTGEPEEAVRRGDEPETFIHLRQQLDNKARAMCKSEDCLKGLKLVRFTTV
SCEDFLVMGLRYQHTDPPSPQVDYIAVRLDLKDTRSGSIYQSEQAWIPVQITGATPNQPP
KPAYMSMFILEVDQFILTPLSTATLDAEDEETPKQLLVFNITTAPQDGFITHLSDHTRPV
SSFTWLDLNDMLVGYQPANFSHNQRRNYEVEFEVHDFYFEKSPTLTVHMSVRTADTNAPR
VSWNMGLSLLEGQSRPITWEQLQIVDNDNLDAVRIITVDGLQHGRLTVRGGKGFMFTVND
IKGGVVCYHHDDSDSTKDFIIFRITDGHHQTRHKFPIKILPKDDTPPFLITNMLLEVPEG
HTALLRGSTLQASDMDSSDDYILFNITRPPQSGEVMKIPGPGKTGYPVSHFLQKDLSQSK
VYYRHLGHEVSDDWFEVVLSDFHDPPNLSEAQVVMVHVEPVPDKPPKEVPGSSRCLVLKE
TDVVHITRQQLHFADPQSADRELTFTVTTPPFYSRPHSNPDAGRLFLVDSIPKFTKDANA
PMLKVFTQHAVNFMKVAYMPPIMDIGQYSQQIQFVLSVTNHLGKTVTGICFNITVEPVDN
QPPQVVTKPLTVDEGGERRLGPEHVLLSDQDSSEEALRVELQREPQHGALHLGGLLMKPG
QSFTLQDLKSHKVRYSHDSSETTQDNIEFTATDGTSSVIFVLQVMVKPINDEVPVVGAGL
KPGLSCAEGQEVVITTEYIYATDRDSDNSSLSFLIVQQPHHGVVLRKGAAVDRFIQADIT
AGIITYKHSEVEIGLSPRHDTITFVISDGETETLALCCSGGSPVRVSSTAHLRQTLPVYD
LQITVFPVDSQPPTLETPDIFKVNEGGTAPITAAHLKASDMDTVLDELVISLTSPPQFGY
IENVLPTPGFEKSNTGVSIASFSYKDIMEGHVNYVQSRHQRVEPTADHLMLCVTDGKHSS
AHVSFYIIINPTNDEAPEFVTHNITVQEGKMKQLDSSVLHATDLDIPKNVLLFSVATPPR
HGSIITHSRGDGKKRETQHQLPVVAFTMADLINDMDVMYVHDDSESAEDSFTIQLTDGRH
QVLKQVMVKVLQVNDEKPHLIRNTGLDVEPGEARLISSASLLAQDRDTPSSELMYIFESV
PTQGLLQLKEHQGWVTLAAGNNCTQEMVDMNLLRYVNTGRRAANSQDFFVFHLLDGKNES
PSQHFQISIKDLDQGNIVVFVKPANVSRGDRIVLTTDVLLATDGTDKPEELLYTITSPPA
HGHIEYMKHPGLIISTFSQMDIAANLVAYVHDSRASTPKETFQFIVSNGKTSLNGSFEIG
VETVDRILPSLSSNKVLTLPQGASMILGPDYLSLSDPDTPPSTLTFVLSQPPQYGRLVLA
GETLSTGSNFTQRDIEELEVAYKHDGGPSQIDRFSFTGSDSTNRGFLLDGLLHREPVFFT
IQIRPLDKSPPEVVKLLPLWKAERLADGRYGIFLSSQELKARDINSREEELTFCIVRPPH
FGFLENITTGGFVPQRFLQMELNKRCIVYIISLDTESLSDSLEFRVSDLLGNTGPRHLLE
FRWSRVELLQTESSACEEQGTISLDIIRRGNLAVSSYIAVKVNEVTATAGKDFLTNPSAL
VQFDPGVSKRRWQMEIIHDHLEEAEETFEVVLVSPVSTVIGSINKATLTIRDSAGGQCRL
EQNQEAPVLGGQEIQSNTYPQHGSIHLEKLPLGTDSIIWTRGDSISRPGAGLPQKKLRVR
GNAKSIAPSSVFHNGTDTVYTYHGIIQMQVEDDTSPSRKGRKANIQVVSRGAHQRRSEGS
KSHPHRNILKPQKAGVAKGHTTAGNPVPKPCVPELRGLLHLNQATNELFHCNGVSWKPWA
PTDQMVSAQMCPQGSTFHGGYCYILSTERKLTWSEANRACRERFKATLASVVSKADMDWL
WDFGGRKPFWIGLNDREGGGRWEWAGGEPVGYTNWRKMPPQTKKKESKKCVLVWRRAKWQ
IRDCKTSRGHHFVCSLKI
NT seq
6537 nt
NT seq
+upstream
nt +downstream
nt
atgggctcacctgttcagctcctggcctggatgtgtcttcctctgctcttggttgtgcac
tgtgcatcacatggttcccttgttaaagtcaacaagggtttaaaagtgaaacgaggccaa
tcggcctaccttcacgtggaggacttgcagttccacattccccatcagaaggattcgtgc
aagttggaggtggtgatgaacgagcccataactcagcgagtaggaaaactgctgcctcag
gtgtttgattgtgattatctggccgatgaagtaaagtatgtccacaacggctgcccgttg
ttgaaagaagacactgtcaagcttcgcctgtacaggttcacagagacagagacatacatg
gaggtcttttccatccatgtagaaattatggagcctgagtgcaccatcattaggttgggg
ccaaaatccctggaggttcctgagttctacagcctctcgaatgctgtggatggaaatgtg
gtctccttccactatgaaaggaggtcaagcttggaatgtagcatccatctgaatagccat
gacacccatctgccaacccacgggcagctggtcacaggggaaccagaggaagccgtcagg
agaggggatgagccggagacattcatccatttgcgtcagcagctggacaacaaagccaga
gcaatgtgtaaatctgaagactgcctgaagggtctgaagctggtgaggtttaccacagtt
tcctgtgaggacttcctggtgatggggctgaggtaccagcacacagaccctccatctcca
caggtagattacattgcagtcagactggatctgaaggacaccaggagtggcagcatatat
cagtctgaacaggcctggatcccagtgcagatcactggtgcaacgcccaaccagcccccc
aaaccagcctacatgtccatgtttattctggaagtagatcagttcatccttactccgctc
tccactgctacgctggatgctgaagacgaagaaactcccaaacagcttttagtgtttaac
atcacgacagctcctcaggacggcttcatcacccatctgtctgaccacactcgcccagtc
tcctccttcacgtggcttgatctcaacgacatgctcgttggatatcaacctgctaacttc
tcacataaccaacgtaggaactatgaggtggagtttgaagttcatgacttttactttgag
aagagcccgacactaactgttcacatgtctgtgaggactgcagatacaaacgctcccagg
gtgtcctggaacatgggtctcagcctgttagagggtcagtctcgtccaataacatgggaa
cagcttcagattgtggacaacgacaacctggacgccgttcgtatcataactgtggacggc
ctgcagcatggacggctaacagtcagaggtggaaagggcttcatgtttactgtcaatgac
ataaaagggggagtggtctgctatcaccatgacgacagtgactccaccaaagacttcata
atctttcgcatcactgacggtcatcatcagacccgacacaagttccccatcaagatcctc
cccaaggatgacacgcctccttttcttatcaccaacatgctgctggaggtccctgagggc
cacacagctctgctgagaggctccacccttcaggcctctgacatggactccagtgatgac
tacatcctctttaacattacccgcccccctcaatcaggggaggttatgaaaattcctgga
ccagggaaaacaggttaccctgtcagccactttctgcagaaggacctgtctcagtcaaag
gtttactatcgtcatcttggacatgaggtgtctgatgattggtttgaggtggtactgtct
gatttccatgacccacccaacctatcagaggctcaggtggtgatggtgcacgtcgagccg
gttccagacaaaccacctaaagaggttccaggttccagtcggtgtcttgtgctgaaagaa
acagacgtagtccacatcacacggcagcagcttcactttgcagacccgcagtcagctgac
agagagctgacgtttactgtgactactccacctttttactctcgtccccacagcaatccg
gatgcagggaggctgtttctggtcgacagcatacccaaatttaccaaagacgccaacgcg
ccaatgctgaaggtcttcactcagcatgcagtaaacttcatgaaagtagcctacatgcct
ccaatcatggacatcggccagtactcccagcaaatccagtttgttctctctgtaaccaac
catctaggtaaaacagtcactgggatctgctttaacatcaccgtagagccagtggacaac
cagccgccacaggttgttaccaagcctctgaccgtagatgagggaggggagcgcaggctt
ggccctgaacacgtgctgctgtcggatcaggactcttcagaagaagctctgcgggtggag
ctgcagagggaaccacagcatggggctctgcatctcggtggcctcctgatgaaaccagga
caaagcttcactctgcaagatctgaaaagccacaaagttaggtacagtcatgacagctca
gaaactacacaggacaacattgaattcactgcaacagacgggaccagttcagttattttt
gtcttgcaagtgatggtgaagcccatcaatgatgaggtcccagtagtcggtgcaggtttg
aaaccaggtctcagctgtgcagaggggcaggaagtagtcatcaccacagagtacatctat
gccactgatagagacagcgacaacagcagcctgtccttcctaattgtgcagcagccgcat
cacggtgtggtactgagaaaaggtgcagcggtggaccgcttcatccaggcagacatcact
gcagggatcatcacatataaacactcagaagtagagattggactcagtcctcgccatgac
accatcacctttgtcatttctgatggagagacggagacgctggctttatgctgcagtgga
gggagtcccgtcagggtcagcagcactgctcatctgaggcagactctacccgtgtacgac
ctccagatcaccgtgtttcctgttgacagccaaccacctacgctagaaacaccagacatc
tttaaagtgaatgaaggtgggacggccccgattactgcggctcacctgaaagcctctgac
atggacacagtgctggacgagctggtcatcagtctgacctccccgcctcagtttggctac
attgaaaatgtcctccccactcctggttttgagaaaagcaacaccggagtgagcatagct
tctttttcatacaaggacatcatggagggtcatgtcaactatgtgcagtccagacatcag
agggtggagccaacagctgaccacctgatgctctgtgtcacagacggcaaacacagctcc
gcccatgtctctttctacatcattataaaccccacaaatgatgaagccccagagtttgtg
actcacaacatcacggtacaagagggaaaaatgaagcagctggactcgtctgtcttacat
gcgacggatctggacatccccaagaacgtgttgctctttagtgtggccacaccccctcga
cacggcagcatcatcacccacagcaggggagacggcaagaaacgagagacccagcaccag
cttcctgttgttgcctttactatggcagatcttataaatgatatggatgtgatgtacgtg
cacgatgactctgagagtgcggaggacagtttcaccatccagctgactgatggacggcac
caagtcctgaaacaggtgatggttaaagtgctgcaagtgaatgatgagaagccccatctt
atcaggaacaccggcctagacgtggagccaggtgaagccagactgatatccagcgcgtca
ctgttggcacaggaccgtgacacgccttcctcagagctcatgtacatttttgaaagcgtc
ccaacccaaggactgcttcagcttaaagaacatcagggctgggtcacactggctgctggg
aacaactgcacccaagaaatggtcgacatgaaccttctacgttatgtgaacacaggccgt
cgtgctgctaacagccaggatttctttgtcttccatttgctggatggaaagaatgaatca
ccctcacagcacttccagatctccatcaaagacctagaccaaggaaacattgtcgtcttt
gtgaaaccagcgaacgtcagccgtggagatcgtattgttctcaccaccgatgtgctgcta
gccacagatggcacagacaagccagaggagcttctgtacaccatcaccagtccgcctgct
cacggacacatagagtacatgaaacatcccggcctcatcatttctaccttcagccagatg
gacatagcagccaacctcgtggcttatgtccatgatagccgagccagcacacccaaagaa
accttccagtttattgtgagcaatggtaaaaccagcctaaacggcagctttgagatcggg
gtggaaacggtggatcgtatcttaccatctctgtcctccaacaaagtcctcacgctgccc
cagggagcttccatgatcctgggtccagactacctgtctctgtcagaccctgacactcca
cccagcacgctgacatttgtcctttcacagccgccacagtacggcagactagttttagct
ggtgaaacactgagcacgggttctaatttcacccagagagacatagaggagctggaggtg
gcatataaacacgatggggggccgtcacagatagaccgattctccttcactggctctgac
agcactaatcgagggttcctgctggacgggctgttacacagagagcctgttttcttcaca
attcagatcaggcctttggataagtcgcctcctgaggttgtgaaactgcttcctctttgg
aaagcagagcgtttagctgacggccgatacggcatctttctgtcatcccaagaactgaag
gctcgagacatcaacagcagagaagaagagctcacattctgtatagttcgccctccacac
tttggtttcctagaaaacattaccacaggtggttttgtgccgcagcgcttcttgcagatg
gagctaaacaagagatgtattgtatatatcatcagtctggacacggagtctctctcagac
agcctggagttcagagtgtccgatctgctgggaaacacagggcctcgtcacctactcgag
ttcaggtggtcccgggtggagctgctacagaccgagtcttcagcatgcgaggagcaggga
acgatctcactggacatcattcgtcgggggaatttggccgtatcctcatatattgctgtc
aaggtaaatgaggtcactgcaactgctggaaaggatttcctcacaaacccttctgcactc
gtccagtttgatccaggagtgtcaaagcgaaggtggcaaatggagattattcacgatcac
cttgaggaggctgaggagacatttgaggtggtgctagtctctcctgtaagcacggtcatt
ggcagcatcaacaaagctacgctcaccatcagagactcagcaggagggcagtgcaggcta
gagcagaatcaggaggctcctgttcttggaggacaggagatccagtccaacacgtaccct
cagcatggatccatacacctagagaaacttcctcttgggacagactccatcatctggacg
cgtggagacagcatctccaggccaggagcaggactcccccaaaagaaactcagagtcaga
ggcaatgcaaagtcaattgcaccatcatcagtttttcacaatggaacagacacagtttac
acatatcatggcatcatccaaatgcaagtagaagatgacacctcaccatccaggaagggc
agaaaggcaaacatccaggtggttagcaggggggcacaccagcgtcggtcagaggggtcc
aagtcccatcctcacagaaacatcttaaaacctcaaaaagctggtgtggctaagggacat
actacagctggtaaccccgtccccaaaccctgtgtgccagaacttagaggcctccttcat
cttaaccaagctaccaatgagctctttcactgcaacggtgtctcctggaaaccctgggca
ccaactgatcagatggtgagtgctcagatgtgtcctcagggctccacctttcatggtggt
tattgctacatcctcagtactgaacgcaagctgacgtggagtgaagcaaacagggcctgc
agggaaaggtttaaagcaacactggcaagtgttgtgtctaaagctgacatggactggctg
tgggactttggtggaagaaagcctttctggatcggtctgaacgacagggagggcggaggg
cgctgggagtgggccggaggcgagccggtcggctacaccaactggagaaaaatgcctcct
cagacaaaaaagaaggaaagcaaaaagtgtgttctggtttggaggagggcaaagtggcaa
atcagggactgtaagacgagcagaggtcatcactttgtctgctcgcttaaaatctga
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integrated database retrieval system
