Oreochromis aureus (blue tilapia): 116312700
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Entry
116312700 CDS
T07295
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116312700 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oau03041
]
116312700 (ddx46)
Enzymes [BR:
oau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116312700 (ddx46)
Spliceosome [BR:
oau03041
]
Complex A
U2 snRNP components
U2 related factors
116312700 (ddx46)
Complex B
116312700 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
116312700
NCBI-ProteinID:
XP_039473930
Ensembl:
ENSOABG00000016200
LinkDB
All DBs
Position
LG10:24905707..24920455
Genome browser
AA seq
1059 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSKSRSPDKRSKKDERSRRERSRSRDRRRSRSRDRKRARR
SRSRERRRSRSRDRRRSGSRSRARRSRSGSPSKSSKKDEKAKSKEKDTLEPISEKKKIKE
EKEDEKVEDQDFDQNKLEEEMRKRKERVEKWREEQRKKAIENIGEIKKELEEMKQGKKWS
LEDDDDDDEEGSAVMEGDDDEEADGKGERKEELNDGKKEGNDDKDKETPMEQQTEEDDID
PLDAYMEEVKQEVKKFNIGAMKGNDKKGAMTVTKVVTVVKTKKGPHTHKKKGELMENDQD
AMEYSSEEEEVDLQTALTGFQTKQRKILEPVDHTKIQYEPYRKNFYVEVPELAKMTTEEV
NAYRLELEGITVKGKGCPKPIKTWVQCGVSMKILNALKKHGYEKPTPIQAQAIPAIMSGR
DLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEESEGPISVIMTPTRELALQITKECKKFSK
PLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYVVLDE
ADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPLEIQVGGRSVVC
SDVEQHVLVIDEDKKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSLH
GGIDQYDRDSIINDFKNGACRLMVATSVAARGLDVKQLILVVNYNCPNHYEDYVHRAGRT
GRAGNKGYAYTFITEDQVRYAGDIIKALELSGSPVPPELEQLWASFKDQQKAEGKTIKSS
SGFSGKGFKFDETEHALANERKKLQKAALGLQDSDDEDGALDIEEQIESMFNSKKRVKDL
SAPGAAAGPAGAVAATAAAPGGLPGLGPTSAGNIQKLEMAKRLALKINAQKNLGAEAQDV
MQQATNAILRGGTIMTPSVSAKTIAEQLAEKINAKLNYTPVEKLEEERQAAEQAETVRRY
EEELEINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLAIES
ANELAVQKAKTEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtgagtcaaggcattaccggaaacgttccgcatctcggggacggtcgggtagc
cgatcaaagagtcgctccccggacaagcgctccaagaaagacgagcggagccggagggag
aggtcacggagccgggatcgccgcaggtcgcgctccagagacagaaaacgagccaggcgc
tccaggagcagggagaggaggaggtcgagaagccgagacaggaggcggtcgggcagcaga
agccgagcccggaggtcccgctctggtagccccagcaagagcagtaaaaaggatgaaaag
gctaaaagcaaagagaaggacaccctggagcctatatctgaaaagaaaaagattaaagag
gagaaagaagatgaaaaggttgaggatcaagactttgaccagaacaaactggaggaggag
atgaggaagcggaaggagcgagtggagaagtggagggaagagcagaggaagaaggccatc
gaaaacatcggagagatcaagaaagaattggaggagatgaagcagggcaagaaatggagc
ctggaggacgatgatgacgatgacgaggagggttctgctgtaatggagggagatgatgac
gaggaggcggacgggaaaggggaaaggaaagaggagttaaatgatggtaaaaaagagggt
aatgacgataaggacaaggagactcccatggagcagcagacagaggaggatgatatagat
cccctggatgcctacatggaggaggtgaaacaggaagtgaagaagttcaacattggagcc
atgaaaggaaatgataagaaaggtgcaatgacagtgaccaaagtggtgacagtcgttaaa
accaaaaaaggacctcacacacacaaaaagaagggagagctgatggagaatgaccaggat
gccatggagtactcatcagaggaggaagaggttgatctccagacggctctgacaggcttc
cagaccaaacaaaggaagatcctggagcctgttgatcacacaaaaatccagtatgaaccg
taccgcaaaaacttctacgtagaggtgcctgagctggccaagatgactacagaagaagtg
aatgcgtacaggctggaactggaaggcattacggtgaaagggaaaggctgtcccaaaccc
atcaagacatgggtgcagtgtggagtgtcgatgaagatcctgaacgccctgaagaagcac
ggttatgagaaacccacacccatccaggcccaggccatccctgccatcatgtcgggccga
gacctcattggtattgctaagaccggcagcgggaaaaccatagctttcctgctccccatg
ttccgacacatcatggaccagagacccttggaggaatctgagggacccatctctgtaatt
atgactccaaccagagagctggctctgcagatcacaaaggagtgtaagaagttctctaaa
ccgctgggactcagggtggtgtgtgtttatggagggacgggcatcagtgaacagatcgct
gagctgaaaagaggagctgagatcatcgtgtgcacaccgggaagaatgattgacatgttg
ggggccaacagcggtcgggtaaccaacctccgcagagtcacatatgtggtcctggatgag
gcagacaggatgtttgacatgggcttcgagccacaggtgatgcgtatcgttgacaacgtg
cgtccagaccgtcagacggtcatgttctcagcaactttccccagagccatggaagcgctg
gctcgcaggatcctgtcaaagcccctggagatccaggtgggaggccgcagtgtcgtctgc
tctgatgtggagcaacacgtgctagtgatcgatgaggacaagaaattcttgaagctgctg
gagattctgggtcactaccaggaaaaaggatctgttatcatctttgtggacaaacaggag
catgcagatggactgctcaaagacttgatgaaagcctcgtacccctgcatgtctttacat
ggaggaatcgatcagtacgacagagacagcatcatcaacgattttaagaatggagcgtgt
cgtctgatggtcgccacctctgtggcagccagaggccttgacgtgaagcagctgatcctg
gtggtcaactacaactgtcccaaccactacgaggactacgttcacagggccgggcgcacg
ggcagagcaggcaacaaggggtacgcctacacgttcatcacagaggatcaggttcgctat
gctggcgatatcattaaagctctggagctgtcgggctctccggtcccaccagaactggag
cagctttgggcctctttcaaagaccaacagaaagcggagggtaagaccattaagagcagc
agtggtttctcaggaaaaggcttcaagtttgatgagactgagcatgctctggccaatgag
aggaagaagctgcagaaagctgctctcggtttgcaggactctgacgatgaggacggagcc
ctggatattgaggagcaaattgaaagtatgtttaactccaagaagagggtgaaggatctg
tctgctcccggcgcggctgctggtccagctggagctgttgccgccacagcggccgccccc
ggaggtttgccaggactcgggcctacatctgctggtaacatccagaaattggaaatggcc
aaaaggctggcgctcaagatcaacgctcagaagaacctgggcgctgaggctcaggatgtg
atgcaacaggcaaccaacgccatcctgcggggcggcactatcatgaccccctccgtgtca
gccaaaaccatcgcggagcagctggcagaaaagatcaatgcaaagctcaactacaccccg
gtggagaagctggaggaagagcggcaggcggctgagcaggctgagacagtcaggagatat
gaagaggagctggagatcaacgacttccctcagactgccaggtggaaggtgacatctaaa
gaagctttgcagaggatcggtgaatactctgaagctgccatcaccatcagaggaacgtac
ttccctccaggcaaagagcccaaggaaggagagcgcaagatctacctggctattgagagt
gcaaatgaactggctgtgcagaaagccaaaacagaaattacacggctaatcaaggaagag
ctcatccgattacaaaactcctaccagccgacgagcaaaggccggtacaaagtgctgtag
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integrated database retrieval system
