Oreochromis aureus (blue tilapia): 116321354
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Entry
116321354 CDS
T07295
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oau03041
]
116321354
Spliceosome [BR:
oau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116321354
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
116321354
NCBI-ProteinID:
XP_031597034
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All DBs
Position
LG6:complement(24387402..24428958)
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AA seq
457 aa
AA seq
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MLMSTDVASIMLPVSRGLIDRDRELDPMAGVHPNPGGAPAAVRGMKRGDPEPDGQTAAAL
VDSTGAECKRPRIDGTGGMGEVGQNNDPLTLSYHGYPSHSQGSQDSAGGQEGLVPPPFSA
FPPPPPPPPQNGLALDYGGSLYAAGAVQGPVEAGGAANSAANAANSLSAQQSDGSSQIDG
QSGVGSGGGGGGGNAGDDLDSKATPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN
ERGSKGFGFVTFESSADAERAREKLHGTLVEGRKIEVNNATARVMTNKKMTTPYSNGEGL
AALPYAGWKLSPMVGGIYSPELYTVPGFPYPAAAAAAASTAATFRGAHLRGRARPVYSAV
RAAVPQPAIPTYPGVMAYQDGFYGAADLYGGYAAYRYAQPAAVATPAAAAAAAAAYSDSY
GRVYTADPYHAALAPAAYGVGAMATLYRGGYSRFAPY
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatccatcatgctgcctgtatcccggggtctcatagac
cgggatagagagctggaccccatggccggggtgcatcccaaccccggtggcgctcctgca
gctgttcgcggcatgaaacgaggagacccggagcctgacggacagacagcggcggctctg
gtggactcgaccggcgctgagtgcaagcgtccccgcatcgacggcacaggaggaatgggc
gaggttggtcagaacaacgaccccttgacgctcagctatcacggatacccgtctcatagt
cagggttctcaggatagtgctggcggtcaggagggactcgtacccccacctttctctgcc
ttcccgcctcctccaccgccgcccccccagaacggcctggccctggattacgggggcagc
ctgtatgctgcaggggccgtccagggtcccgtggaagccggcggagcagcgaatagcgca
gccaacgccgctaacagtctcagtgcccaacagtcagatgggtcctcccagattgacggc
cagtctggggttggctcgggaggtggaggcggtggggggaacgccggagacgatttggac
tccaaggcgacccccaaacgccttcacgtatctaacatccccttccgcttccgagaccct
gacctacggcagatgtttgggcaatttggcaaaatccttgatgtggagatcatttttaac
gagaggggatcgaagggcttcggttttgttacgtttgagtcgagcgcagatgcagagagg
gccagagagaagctccacggcacgctggtggaaggacgtaaaatcgaggtcaataacgcc
acagccagagtgatgacaaacaagaagatgaccacgccgtactcgaacggagagggcctt
gcggcactgccatatgctggatggaagctgagtcctatggttggaggcatttacagtcct
gagctctatacagtaccagggtttccgtacccagcagcagcggcagcagctgcctcgacc
gctgcaacctttcgaggcgctcatctccgaggtcgtgctcggcccgtctacagcgcagtc
agggcagctgttccacagcctgccatccccacctatcctggtgtgatggcctatcaggat
ggtttttacggtgcagctgatctctatggtggctatgcagcgtatcgatacgcccagccg
gctgcagtagcaactcctgcggcggcagcagctgcagcggcagcttacagtgacagttat
ggacgagtttacacggcagatccctaccacgctgcacttgccccagctgcctacggcgtt
ggagccatggccacgctgtacaggggaggctacagtagatttgctccctactaa
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