Oreochromis aureus (blue tilapia): 116323927
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Entry
116323927 CDS
T07295
Name
(RefSeq) VPS10 domain-containing receptor SorCS1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
116323927
Membrane trafficking [BR:
oau04131
]
Protein recycling
Others
Others
116323927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
SHOCT
Motif
Other DBs
NCBI-GeneID:
116323927
NCBI-ProteinID:
XP_039469919
Ensembl:
ENSOABG00000009449
LinkDB
All DBs
Position
LG6:40076462..40261019
Genome browser
AA seq
1242 aa
AA seq
DB search
MNGEVIFCPKWHRAFWFLLFAVPCFLHAGEAEITCRSCQPGSKWRGKELLLKFHTSESAT
GFRGQVFGNGERRFGAASAETPRLSCAVGSAECARARVEYPETSLKRNTRDLRAKGELGQ
SEFTQMKVSNVSTSGQKKNGRVEGVRRRARRNSHGDKLGSPRSAQNQDRGEATGTVAGRR
VTRSELRWSGEERRAAGPRQEELKLNSSTFALTGDSSHNQAMVHWSGQNSSVILMLTKLF
DFNLNSVTESSLWRSTDYGATYQKLNDKVGAKTILSYLYVSPNNKRKIMLLTDPEVESSL
LISSDEGATYQKYRLNFYILSLLFHPEQEDWILAYSHDQKLYSSVEFGRRWQLVHERVAP
NRFYWSKMGLDKEPGLIHLETSITEGQALYVTCKLQNCTDANKGKPFPGYIDPNSLVVQD
EYVFVQVSTGGRPIYYVSAKRDVFTPMKLPKYTLPKDLHVISTDENRVVAAVREWNQNET
YNLYVSDTSGVYYTLALENVVSSMGPEGNVMVDLYEVAGIKGMFLANKRTDNQVKTYITY
NRGRDWRLLQAPSKDLRGNSIHCVLPYCSLHLHLHVSANPYTSGNIASRDSAPGIIVASG
SIGAELTTSNVSVFITSDAGNTWRQIFDEEYAVLYLDQGGALVAIRHTPLPIRHLWLSFD
EGRQWNKYSFTNTPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCIE
ADYQTWHLHNQGEPCLMGVKRIYRKLKPTSRCVMGKTYSVTMTSAPCDCTEADFECDYGF
ERRTDGKCTPAFWFHPSSMSRSCTTGMTFLNSTGYRKVVSNNCTAGVSAEYTARRQQCPI
QAPKGLHLVTSEGSLTAVLGTNVTFLVFLEEGDGARTSITLDFGDGHALTYSNVSSIEDG
IKHIYKAVGIYRVTATGENSLGSETAMLYLHVTCQLEYIHLSAPFVAVRNKEVNLTAVLW
PSQVGTVTYIWWIGNNTEPVITLEGSVAYTFSREGINTVTVQVSAGNTILQDRKTIAVHE
YFRSHLLAFSSNLDEHNPDIAEWRLDVSRVIKNSLIQATGVREDQLLVTVLPGLPTAAEF
FLLPDKQITEGKPEKSSAHLDQLSELLLSALNQNLVQFTLRPGVQVTVYAAHLSAAPLVD
TSENHSGSAMLMLLSVVVVGLAVFVIYKFKRKIPGLNVYAQMQNEKEQEMSPANPTVATP
SSQRDLVHSLEILDTEFNSRPIGCMKPHVHVKFSTELPTYIV
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgaacggggaggtcatattttgcccaaagtggcaccgcgcgttttggtttctgcttttc
gcggtgccctgcttccttcacgccggcgaggctgagataacttgccgctcatgccagcct
ggaagtaagtggcgcggaaaggaattactgctgaaatttcacacgagtgagtccgcaaca
gggttcaggggacaagtttttgggaacggcgagcggagattcggggctgcgagtgcggaa
actccgcggctcagttgcgcagttgggtccgctgaatgcgctcgagctcgggtggaatac
ccggagacgagcctcaaacggaatacacgagatctgcgcgcaaaaggcgaactcggccag
agcgagtttacgcagatgaaagtttccaacgtgtcgacgagtggccagaagaagaacggc
cgtgtcgaaggtgtgaggaggcgcgccaggaggaacagccacggggacaaactcggatcc
ccccgttcggcccagaatcaggaccggggagaggccacgggcacggtggctgggcgcaga
gtgacgcgctctgaattgcgctggagcggagaggagcggagagccgccggtccgaggcag
gaggagctaaaacttaacagttcgacgttcgctttgaccggagattcgtctcacaaccag
gctatggtgcactggtccgggcagaacagcagcgtgattctgatgctgaccaaactattt
gactttaacctcaacagcgtgactgagagttcattatggaggtcaacagactacggagca
acgtaccagaagctgaatgacaaagtaggagcaaagacaatactcagttatttgtacgtg
agccccaacaacaagagaaagatcatgctgctaaccgatccagaggtagagagcagcctt
ctgatcagctctgatgaaggagccacctaccagaagtaccggctgaatttctacatcctc
agccttctgttccaccctgagcaggaggactggattctcgcctacagccatgaccaaaag
ctctacagctcggtggagtttggacggaggtggcagctggtgcacgagcgagtggctccc
aatcgtttctactggtcgaaaatgggtttggacaaagagccgggcttaattcacctggaa
accagcatcactgaaggacaggcgctgtatgtcacctgcaagctgcagaactgcaccgac
gccaataagggcaaaccattccccggctacattgaccccaattctctggtggtgcaagat
gagtatgtgtttgtccaggtgtcaactggggggaggccaatctactacgtgtcagctaaa
agagatgtcttcacccctatgaagctgcccaagtatacgctgcccaaggatctgcatgtg
atcagtacggatgaaaaccgtgtcgtcgcggctgtgcgggagtggaaccagaatgaaacc
tacaacctgtatgtgtcagacacttcgggggtctactacactctggctctggagaatgtg
gtcagcagcatgggccccgagggaaacgtcatggtcgacctctatgaggtagcgggaata
aaaggaatgttcctcgccaacaaaaggacggacaaccaagtgaagacgtacatcacctac
aacagaggcagagactggcggttactgcaggcgccgagcaaagacctgagaggcaacagc
attcactgtgtgctgccatactgttcattacatctccatcttcacgtgtctgcaaatccc
tacacatctggaaacatcgccagcagggactcggcgccggggatcattgtcgcatcaggc
tccattggggcagaactgaccaccagcaatgtcagtgtgttcatcacctcggacgcagga
aacacatggagacagatttttgatgaggagtacgcagtgctgtatcttgaccaaggaggg
gccttggtggcaataagacacactccgcttcccatccgacacctgtggttgagcttcgac
gaaggacggcagtggaacaaatacagcttcaccaacacgcccctgtttgtggacggggtg
ctcggagagcccggggaggagactctcatcatgacgatatttggacatgtcagtcatcga
tcggagtggcaattggtgaaaatagacttcaggtccattttcaacaggaggtgtatagag
gcagattatcagacatggcacctgcacaaccagggtgagccgtgtctgatgggagtcaaa
agaatctaccgaaagctgaagcccacgtccaggtgcgttatgggaaagacatactcagtg
accatgacatcggcaccatgcgactgcacagaggctgactttgaatgtgattacggcttt
gagagacggacggacggcaagtgcacccccgccttttggttccatccatcatcgatgtcc
aggagttgcaccacggggatgactttccttaacagcaccggctacagaaaagtggtctcc
aataactgtacagctggtgtgagcgcagagtacacagccaggaggcagcagtgtcctatc
caagcacccaaaggtctccacctggttaccagtgagggttcgctgacagccgtgttaggc
accaatgtcacctttcttgtttttctggaggagggtgacggggcgaggacgagcatcact
ctggactttggagatggccacgctcttacatattccaatgtgagctccatcgaggatggg
atcaaacacatctacaaagctgtgggaatctaccgagtgactgctaccggggagaacagc
ttgggctcagagaccgccatgctctacctgcatgtcacatgtcagctggagtatatccat
ctctcagctccctttgtggctgtgaggaataaggaagtgaacctgactgctgttctgtgg
cccagccaagtgggaacggtcacctacatctggtggatcggaaataacacagagccagta
atcaccctagagggaagtgtggcgtacacattctcccgggaaggcatcaatacagtcact
gtgcaggtgtctgcagggaatactattctgcaggacagaaaaaccattgctgtccacgaa
tatttccgatctcatctgctcgccttttcatcaaacctggatgagcacaaccccgatatt
gcagaatggaggctggatgtgagccgagtcattaagaactctctgatccaggctacaggc
gtgagagaggatcagctcctggtcactgtcctcccaggtttacccacagcagcagagttt
ttcctcctgcctgacaaacagataactgaggggaaaccagagaagagctcagctcattta
gatcagctttccgagcttttgctcagcgcactcaatcaaaatctcgtccagttcacgttg
cggcccggggtccaagtcaccgtgtatgcagcgcacttatcagcagcgcccctagtggac
accagcgagaaccacagtggctctgccatgctaatgctgctatcagtagtggttgtgggt
ttagctgtatttgtcatctacaaattcaagaggaagatcccaggcctcaacgtctatgcg
cagatgcagaacgaaaaagaacaagaaatgagtccagcgaatccaacggtggccacgccc
agctctcagcgggacttggtgcattctttggagattctggacacagagtttaactcgcgg
cccatcggatgtatgaaacctcatgtacatgtgaaattttccacagaactccccacgtac
atcgtctaa
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