Oreochromis aureus (blue tilapia): 116324350
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Entry
116324350 CDS
T07295
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03022
Basal transcription factors
oau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116324350 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
116324350 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oau03021
]
116324350 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
oau03400
]
116324350 (gtf2h4)
Transcription machinery [BR:
oau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116324350 (gtf2h4)
DNA repair and recombination proteins [BR:
oau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116324350 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
116324350
NCBI-ProteinID:
XP_031600784
Ensembl:
ENSOABG00000007806
LinkDB
All DBs
Position
LG22:complement(138136..150897)
Genome browser
AA seq
461 aa
AA seq
DB search
MKLRVQLQCKNLHEYLKELSPEILDRLYNHPATCLAVYRELPSLAKNYVMRMLFLDQPLP
QAAVALWVKKDSQKDHDECVSVLAGLRLWHSQQLQGGLQGYILNPVFKDNLKTALLGGGR
AWADEGSTLGPDRHARDIESLDRYAMERWEIILQFMVGSPSAVSQDLAQLLVQAGLMKSE
AGEAPYITSAGFQFLLLDTASQLWYFTLQYLKTAQSRGMDLVEILSFLFQLSFSSLGRDY
SVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTSSSSASNLSSSPGT
GDAGFIVVETNYRIYAYTNSELQIALVALFSEMLYRFPNVVVAQLTRESVQQAIANGITA
QQIIHFLRTRAHPVMLTQTPVLPPTITDQIRLWELERDRLQFTEGVLYNQFLSQADFEVL
RDRAQGLGCLVWQDVAHRVMVVTPQGHSEVKRFWKRQRSHT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtgtccagctgcaatgcaagaacctgcatgaatatctgaaggagctgagt
ccggagattttggacagactctacaaccacccagcgacatgcctggctgtgtacagggaa
ctcccctctctggcaaagaattatgtgatgcgcatgctgttcctggatcagcctctcccc
caggcagctgtggcattgtgggtaaagaaagacagtcagaaggaccacgatgaatgtgtc
tcagtgttggcaggtctccgcctctggcacagtcagcagctgcagggtggtctgcaggga
tacattttaaatccggtgtttaaagacaacctgaagacagctttgctcgggggggggcga
gcttgggctgatgaggggagcacgctcgggcctgaccgccatgcacgagacattgagagt
cttgaccgctacgctatggagcgctgggagatcatcctgcagtttatggtaggttctccc
agcgctgtcagccaggacctggcacagcttttggttcaagcaggcctcatgaaaagtgaa
gcaggagaggcgccctacatcacctcagctggcttccagttcctccttctggacacagcc
tctcagctatggtacttcaccttgcagtacctcaaaactgctcagtccagagggatggac
ctggtggagatcttgtcattcttattccagctcagtttctctagtctgggcagagattac
tcggtggagggtatgagcgagtcattacttacttttctgcagcacctgcgagagtttgga
ctggtgttccaaagaaagaggaagtccaggagatattatcccaccaggctggcaatcact
ctggctgcaggagtcaccagcagctcctccgcctctaacctgtcttccagtcctggcact
ggagatgcaggtttcattgtggtggaaaccaattatcgtatctatgcctacacaaattca
gaacttcagattgctctggtggctctcttcagtgaaatgctctaccgcttccccaatgta
gttgttgctcagctgacaagggagtctgtgcaacaggctatcgccaacgggatcactgca
cagcagattatccattttctgaggaccagagctcaccctgtcatgctcactcagacccca
gtactgcctccaactataacagaccagatcagactgtgggagctggagagagatcgcctg
cagttcacagagggtgtgctctataaccagttcctctcccaggctgactttgaggttctg
cgagacagagctcagggcctgggctgtctggtgtggcaggatgtggcccacagagtgatg
gtggtgacaccacagggacacagcgaggtcaagaggttctggaaacgacagcgatctcac
acgtaa
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