Oreochromis aureus (blue tilapia): 116325863
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Entry
116325863 CDS
T07295
Symbol
smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oau03400
]
116325863 (smc5)
DNA repair and recombination proteins [BR:
oau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
116325863 (smc5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_21
AAA_13
AAA_25
AAA_29
GCN5L1
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
116325863
NCBI-ProteinID:
XP_031602775
Ensembl:
ENSOABG00000001098
LinkDB
All DBs
Position
LG20:20930498..20941749
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AA seq
1078 aa
AA seq
DB search
MAEPSKRQRLSHINSSSQTSSKSLSSIFTDSQDEGLEGEGRYVEGSILRITMKNFLTYDY
SVVYPGPNLNMIVGANGTGKSSIVCAICLCLAGKTAVLGRGDKVGLYVKRGCKKGHVEIE
LYKRGGNVVIFREIHAENNQSLWMLNDRQCSQKAVEEEVKALRIQVSNLCQFLPQEKVGE
FAKMSKIELLEATEKSVGPPEMYEYHCELKNFRNKERELENIVKEKASFLEKAKQRNERN
KHDVNRYYEKKRHLDVIELLEKKKPWVEYETTRKELEGVKKERDEAKKQLSSLKQTQAPM
VKKIQQIEEQLKPTEAQIKAKTAAIKEASLKCKQKQDQLDRKNKEIDDIKQKCRLKQMEE
EDHQKRISNTRRTIEDLKAELAKVGDQPDVTPRINAVNADLRRIQEERAKIEGEKGDLRR
EKDNLCAESRMLEKKLNDMNNMMNAKEEKLRGRHRDTHTALQWLRQNKQLFRGNVHEPMM
LVINVKDHRFAKYVENHISFHDLRAFVFQRKDDMEKFMIEVRDKMNLKVNSICAPEESCS
KRPPSRNIESLRRFGFFTYLREMFDAPDEVMSYLCHQYRVHDVPVGNERTKSMIKTVIEE
PYLKVLYTTEERYTVKRSFYSNKISTSNSAVHPSQYLTITVDAEEKRQLEQQMKSCESKL
RDIDERMKALQKEAVALDRRDNELLAEKKRLSELKGKKRQLEQKISTKQDSLKQMEQNII
DLKKIEEETKEKIAAVNAEKVTIVTAFMAQMKLRAKLTMEKVHLALETVGLTAEKNKLEN
DCREGASELRTTDQKCSRLEQRKVQLTDQCKGLLKRAKAICKMQPDQSLPEDLRNAFSKL
PDTLDEVDAMLNEERSRAECFTGLSENVVDEYNRREQEIKQMEKELEEKSNALNAYRQNI
SEAKERWLNPLKHLVEQINEKFSAFFRSMQCAGEVDLHSENEEEYDKYGIRIRVKFHATT
QLHELTPYHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPVNERRVFDIVVRTA
CKETTSQYFFITPKLLQNLTYAEEMTILCVHNGPHMLSPNQWDERAFVRRCLERKARA
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacccagcaaacgacagaggctcagtcacattaacagcagctcacaaacttcg
agtaaaagcttatcgagcattttcacggacagtcaggacgaaggactcgagggggagggt
cgatatgtggagggatccatacttcggatcaccatgaagaacttcctgacgtacgactac
tctgtggtgtatcctggacctaatctgaacatgattgtcggggccaatggtactggaaag
tccagcattgtgtgtgccatctgtctgtgtctggctggcaagacagctgttcttggcaga
ggtgataaggttgggctctatgtcaagcgtggttgcaaaaaaggccatgttgaaattgaa
ctgtacaaaagaggtggtaacgtagtgatttttagagagatacatgcggagaacaatcag
tctctgtggatgttgaatgatcggcagtgcagccagaaggcggtggaagaggaagtcaaa
gctctgcgcatccaagtcagcaacctctgtcagtttctacctcaggaaaaagttggcgag
tttgccaagatgtccaaaattgagttgctggaagcaactgagaagtcagtgggcccacca
gagatgtatgaataccactgtgagctcaaaaacttccgcaacaaagaacgagaactggag
aacattgtgaaggagaaagcaagcttcctggagaaagccaagcagcgaaatgaaaggaat
aaacacgatgtaaaccgttactacgaaaaaaagaggcatctggatgtaatcgagttgctc
gagaagaagaaaccatgggtggagtacgagaccacacgtaaggaacttgagggtgtgaag
aaggagcgtgacgaggcgaaaaagcagctttcaagcctaaagcagacccaggcgcccatg
gtgaagaagatccaacagattgaggagcagctgaagccaactgaggcacagataaaggct
aagactgctgccatcaaagaagcctcgctgaagtgcaaacagaaacaagatcagctggat
cgaaaaaacaaagagattgacgatattaaacaaaaatgcagactcaagcagatggaggag
gaagaccaccagaagcgaatcagcaacaccagaagaaccatcgaagacctgaaggcggag
cttgccaaagttggcgaccagcctgatgtaaccccgcgcatcaacgccgtcaacgctgat
ctgaggcgcattcaggaggagagagccaagatcgaaggggagaagggcgacctgcgcagg
gagaaggacaacctttgtgctgaatccagaatgttggagaagaagctcaatgacatgaac
aacatgatgaatgccaaagaggagaagctgcgaggacgtcacagggacacacacactgcc
ctccagtggctcagacagaacaagcaactctttcgtggaaacgtccacgagcccatgatg
ctggtgatcaatgtgaaggatcaccgctttgctaagtacgtggagaaccacatctcattc
cacgacctccgtgcattcgttttccagaggaaagacgacatggagaagtttatgatcgag
gtccgtgacaagatgaacttgaaggtgaactccatctgtgctccggaggagtcatgttct
aagcgaccgccatcccgaaatattgagtccctgaggcgttttgggttcttcacctacctc
cgagagatgtttgacgcccccgatgaggtcatgagttacctctgtcaccagtacagggtg
catgacgtgccagtgggcaatgagcgaaccaaatccatgattaaaacggtgattgaggag
ccctacctcaaggtgctgtacacaacagaggagaggtacactgtcaaaaggtccttttac
tctaacaagataagcaccagcaactctgcggtacacccttcccagtacctcaccatcact
gtggatgctgaagagaaacggcagctagagcagcagatgaagtcctgtgagtcaaagctg
cgagacatcgacgagaggatgaaggctttgcagaaggaagctgtcgcactggaccgccgt
gacaatgaactgttggcagagaagaagcgtctctctgaactaaaggggaaaaaacgacaa
ctggagcagaaaattagtaccaaacaggacagtctgaagcagatggagcagaatattatt
gacctgaaaaagattgaggaggagactaaagagaaaattgcagctgtaaatgctgagaaa
gtgaccatagtgactgcattcatggcccaaatgaagctgagagccaagctgacgatggag
aaggtgcatctggcgttggagacggtgggactgacggcagagaagaacaagctcgagaat
gactgcagagaaggtgcctctgagctgaggaccactgatcaaaaatgcagccgtctggag
cagagaaaggtgcagctgacagaccaatgcaaagggctgctgaagagagcaaaggcgatc
tgtaagatgcagcctgatcagtcattacccgaagacctgcgtaacgctttcagcaagctc
cccgacacgctggatgaggtcgatgccatgctgaatgaggagcgctccagagccgagtgc
ttcactggcctcagtgaaaatgttgtcgatgagtacaacaggagagagcaggagattaaa
caaatggagaaagagctggaagaaaagagcaacgccctgaatgcctaccgacagaacata
tctgaggctaaggaacgctggcttaatcctctgaaacatctggttgaacagataaatgag
aagttcagtgctttctttcgctccatgcagtgtgcaggagaagttgatctacattcagag
aatgaggaggagtacgacaagtacgggatccgcatccgggtgaagtttcacgccaccacc
cagctccacgagctgacaccttaccatcagagtggaggagagcgcagtgtctccaccatg
ctttacctcatggccttgcaggagctcaaccgctgtcccttcagagtggtggatgagatc
aatcagggaatggatcctgtaaatgaaagaagagtctttgacattgtggtccgcacagcc
tgcaaagagacaacgtcccagtacttcttcataacacctaaactgctgcagaatcttacg
tatgccgaggagatgaccatcctttgcgtccataacggcccccacatgctctcccccaac
cagtgggacgagagggctttcgtcagacggtgtcttgaaagaaaagccagggcatga
DBGET
integrated database retrieval system
