Oreochromis aureus (blue tilapia): 116327407
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Entry
116327407 CDS
T07295
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oau04121
]
116327407
Ubiquitin system [BR:
oau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116327407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
SPRY
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_5
zf-RING_6
zf-RING_10
Prok-RING_4
FapA
LMBR1
Gp58
Exonuc_VII_L
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
116327407
NCBI-ProteinID:
XP_039457826
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Position
LG18:29815886..29819941
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AA seq
549 aa
AA seq
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MDQTKFCCSVCLDLLKDPVTIPCGHSYCMNCIKTHWDGEEKKKIYSCPQCRQTFTPRPVL
VKNTMLADFLDELKKTGLQAPPADHCYAGPEDVACDVCTGRKIKAFKSCLFCLASYCKEH
LQPHYEVAPLKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQSICYLCPVDEHKGHNTV
SAAAERTERQRELEVSRQNIQQRIQDREKDVKLLQQEVEAINQSADQTVEHSEKIFTELI
HLIQKRSSDVKQQIRSQQETEVSRVKELEEKLEQEITELKRKDAELKQLSHTEDHIQFLH
NYPSLSALSESTDSSSINIRPLSYFEDVTAAVSEVRDKLQDILREEWTNISLTVTEVDVL
LSDPPEPKTRAGFLKYSKAITLDPNTAHEELLLSEGNRKATLMKQKHYSDHPDRFTSYKQ
LLSRESLTGRCYWEVEWRGRVDVAVAYKNISRAGSVIQCVFGCNDKSWSLDCNNNSYTFW
YNNFQTRVSGPRSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLYAGLGVYNYG
DTAELIKVK
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaacaaaattctgctgttcagtctgtttggatctactgaaggatccggtgact
attccctgtggacacagctactgcatgaactgtattaaaacccactgggatggagaggaa
aagaagaaaatctacagctgccctcagtgcagacagactttcacaccgagacctgtcctg
gtgaaaaacaccatgttagcagatttcctggacgagctgaagaagactggactccaagct
cctcctgctgatcactgctatgctggacctgaagatgtggcctgtgatgtctgcactgga
agaaaaataaaagccttcaagtcctgtttattctgtctggcatcttactgtaaggaacac
cttcagcctcattatgaagtagctccattaaagaaacacaagctggtggagccctccaag
aagctccaggagaacatctgttctcgtcatgatgaggtgatgaagatgttctgccgtact
gatcagcagagtatctgttatctctgccctgtggatgaacataaaggccacaacacagtc
tcagctgcagcagaaaggactgagaggcagagagagctggaggtgagtcgacaaaacatc
cagcagagaatccaggacagagagaaagatgtgaagctgcttcaacaggaggtggaggcc
atcaatcagtctgctgatcaaacagtggagcacagtgagaagatcttcactgagctgatc
catctcatccagaaaagaagctctgatgtgaagcagcagatcagatcccagcaggaaact
gaagtgagtcgagtcaaagagcttgaggagaagctggagcaggagatcactgagctgaag
aggaaagatgctgagctgaagcagctctcacacacagaggatcacatccagtttctacac
aactacccctcactgtcagcactcagtgagtctacagactcatccagcatcaatatccgt
cctctgagctactttgaggatgtgacagcagctgtgtcagaggtcagagataaactacag
gacattctgagagaggaatggacaaacatctcactgacagtcactgaagtggatgtttta
ctgtcagatccaccagagccaaagaccagagctggattcttaaaatattcaaaggcaatc
acactggatccaaacacagcacacgaagagctgttattgtcagaggggaacagaaaagca
acattaatgaaacaaaaacattattctgatcatccagacagattcacttcgtataaacag
ctcctgagtagagagagtctgactggacgttgttactgggaggtggagtggagagggaga
gttgatgtagcggtcgcatacaaaaatatcagcagagcagggagtgtgattcaatgtgtt
tttggatgtaatgacaaatcttggtcattagattgtaacaacaacagttatacattttgg
tacaacaacttccaaactcgtgtctcaggtcctcgttcctccagagtaggagtgtacctg
gatcacagagcaggtattttgtccttctacagcgtctctgaaaccatgactctcctccac
agagtccagaccacattcactcagccactctatgctggactaggggtttacaattatgga
gacactgctgagttgattaaagtgaaatag
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