Oreochromis aureus (blue tilapia): 116329595
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Entry
116329595 CDS
T07295
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oau04121
]
116329595
Ubiquitin system [BR:
oau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116329595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
U-box
zf-RING_10
zf-Nse
zf-RING_6
RSS_P20
Gp58
DUF2383
Motif
Other DBs
NCBI-GeneID:
116329595
NCBI-ProteinID:
XP_039464522
LinkDB
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Position
LG3:44491653..44493875
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AA seq
562 aa
AA seq
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MAQKGVQLDRETFSCSICLDLLKDPVTTACGHSYCRNCIKTHFYEEDRKGIHSCPQCRKT
FTPRPVLEKNVILAALVEQLKKTGLQAAPADHCYAGPEDVACDVCTGRKLKAIKSCLVCL
ISYCEKHLQPHYDVVQFKKHKLVAPSKKLQENICSRHDEVMKIFCRTDQQSICYLCLMDE
HKGHETVPAAAERTEKQKELEVRRLNIQQRIQEREKDVKLLQQEVEAINGSPDKAVEDSE
KMFTELIRLIQKRSSDVKQQVRSQQETEVSRVKELQEKLEQEIAELKRKDGELEQLSHTE
DHNQFLHNYPSLSALSESTHSSSINIRPLRYFEDVTAAVSETRDKLQDILREEWTNISLT
VTEEDVLLSPPEPKTRAGFLKYSHEITLDPNTANTHLLLSEGNRKVTLMKRKQFYSDHPD
RFPVYYQVLSRESLTGCCYWEVEWKRGVVRVAVAYKNMSRVERPFGCLFGYNDKSWALYC
DTNSFQFWHNKVQTVLSGPRSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLYA
GLCVSGHWFLEYGATAELIKVK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcacagaaaggagttcagctggaccgagaaaccttctcttgttccatctgtttggat
ctactgaaggatccggtgactacagcctgtggacacagctactgcaggaactgtattaaa
acccacttttatgaagaggacaggaagggaatccacagctgccctcagtgcaggaagact
ttcacaccgaggcctgtcctggagaaaaacgtcatattagcagctttagtggagcagctg
aagaagactggactccaagctgctccagctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggaggaaactgaaagccatcaagtcctgtttagtctgttta
atttcttactgtgagaaacacctccaacctcactatgatgtagttcagtttaagaaacac
aagctggtggccccctccaagaagctccaggagaacatctgctctcgtcatgatgaggtg
atgaagattttctgtcgtactgatcagcagagtatctgttatctctgcttgatggatgaa
cataaaggccatgaaacagtcccagctgcagcagaaaggactgagaagcagaaggaactt
gaggtgagacgactaaacatccagcagagaatccaggagcgagagaaagatgtgaagctg
cttcaacaggaggtggaggccatcaatggctctcctgataaagcagtggaggacagtgag
aagatgttcactgagctgatccgtctcatccagaaaagaagctctgatgtgaagcagcag
gtcagatcccagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcgctgagctgaagaggaaagacggcgagctggagcagctctcacacacagag
gatcacaaccagtttctacacaactacccctcactgtcagcactcagtgagtctacacac
tcatccagcatcaatattcgtcctctgaggtactttgaggatgtgacagcagctgtgtca
gagaccagagataaactacaggacatcctgagagaggaatggacaaacatctcactgaca
gtcactgaagaggatgttttactgtcaccaccagagccaaagaccagagctggattctta
aaatattcacatgaaatcacactggatccaaacacagcaaacacacatctgttattatct
gaggggaacagaaaagtaacattaatgaaacgaaaacagttttattctgatcatccagac
agattccctgtgtattatcaggtcctgagtagagagagtctgactggatgttgttactgg
gaggtggagtggaaacgaggagtcgttcgcgtagcagtcgcatacaagaatatgagcaga
gtagagaggccatttggatgtttatttggatacaatgacaaatcttgggcattatattgt
gacacaaacagttttcaattttggcacaacaaagtccaaactgtcctctcaggtcctcgg
tcctccagagtaggagtgtacctggatcacagagcaggtattctgtctttctacagcgtc
tctgaaaccatgactctcctccacagagtccagaccacattcactcagccgctctatgct
ggactttgtgtttctggacattggtttttagaatatggagccactgcagagttgattaaa
gtcaaatag
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