Oreochromis aureus (blue tilapia): 116335893
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Entry
116335893 CDS
T07295
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM47-like
KO
K12006
tripartite motif-containing protein 16
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oau04121
]
116335893
Ubiquitin system [BR:
oau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116335893
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-RING_6
Prok-RING_4
zf-RING_10
U-box
Motif
Other DBs
NCBI-GeneID:
116335893
NCBI-ProteinID:
XP_039457169
LinkDB
All DBs
Position
LG3:complement(57541201..57542658)
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AA seq
248 aa
AA seq
DB search
MAQQRNQLDSENFSCSICLDVLRNPVSIPCGHSYCMNCIKSFWDEEDKKGIHSCPQCRKT
FKPRPVVEKNIMLAVLVEELKHTGLQAAAGEQCYAGPEDVACDVCTGRKLKAVKSCLVCQ
DSYCDKHVQRHYNIDRLQKHRLVSPSRKLQEASSSNCEICSHHSEVMKIFCRTDQQSICY
LCTVDEHKGHETVPAAAERTEKQQIHFMQAGPEQGGSDWMLLLGGGVERKMCLCGSRIQE
YQKSCVPH
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcaaagaaatcagctggactcagagaacttctcttgttccatctgtctggat
gtactgaggaatccggtgtctattccctgtggacacagctactgcatgaactgtattaaa
agtttctgggatgaagaagataagaagggaatccacagctgccctcagtgcaggaagacg
ttcaaaccgaggcctgttgtagagaaaaacatcatgttagcagttttagtggaggagctg
aagcacactggactccaagctgctgcaggtgaacaatgctatgctggacctgaagatgta
gcctgtgatgtctgcactgggaggaagctgaaagctgtcaaatcctgtctggtctgccag
gactcctattgtgacaaacacgtccagcgtcactacaatatagatcgattacagaaacac
aggctggtttcgccttccaggaagctccaagaagcgtcatcatctaattgtgagatctgc
tctcatcacagtgaggtgatgaagattttctgtcgtactgatcagcagagtatctgttat
ctctgcacagtggatgaacataaaggccatgaaacagtcccagctgcagcagaaaggact
gagaagcaacagattcacttcatgcaggcaggtcctgagcagggaggctctgactggatg
ttgttactgggaggtggagtggagaggaagatgtgtttgtgtggcagtcgcatacaagaa
tatcagaagagctgtgtgccccactga
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