Oreochromis aureus (blue tilapia): 120436825
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Entry
120436825 CDS
T07295
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oau04121
]
120436825
Ubiquitin system [BR:
oau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120436825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_10
zf-RING_6
LMBR1
Gp58
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
120436825
NCBI-ProteinID:
XP_039463612
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MNQMDQTKFCCSVCLDLLKDPVTIPCGHSYCINCIKSFWDEEENRKIYSCPQCRQTFTAR
PVLVKNTMLADLVEELKKTGLQAAPADHCYAGPEDVACDVCTGRKIKAFKSCLFCLASYC
EKHLQTHYDVAQLKKHKLVEPSKKLQENICSRHDEVMKMFCRTDQQSICYLCPVDEHKGH
DTVSAAAERTERQRELEVSRQNIQQRIQDREKDVKLLQHDVEAINQSADQTVEHSEKIFT
ELIHLIQKRSSDVKQQIRSQQETEVSRVKKLEEKLEQEITELKRKDAELKQLSHTEDDIQ
FLHNYPSLSALSESTDSSSINIRPLSYFEDVTAAVSEVRDKLQDILREEWTNISLTVTEV
DVLLSQPEPKTRAGFLKYSCEITLDPNTANTQLLLSQGNRKVTLMEQQSYSDHPDRFTGW
FQVLSRESLTGRCYWEVEWRGGGVDVAVAYKNISRAGSVNECRFGLNDKSWSLDCNNNSY
TFLYNNIQTPVSGPRSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLYAGLWLY
YYGDC
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaatggatcaaacaaaattctgctgttcagtctgtttggatctactgaaggat
ccagtgactattccctgtggacacagctactgcataaactgtattaaaagcttctgggat
gaagaggaaaacaggaaaatctacagctgccctcagtgcagacagactttcacagcgagg
cctgtcctggtgaaaaacaccatgttagcagatttagtggaggagctgaagaagactgga
ctccaagctgctcctgctgatcactgctatgctggacctgaagatgtggcctgtgatgtc
tgcactggaagaaaaattaaagccttcaagtcctgtttattctgtctggcatcttactgt
gagaaacaccttcagactcattatgatgtggctcaattaaagaaacacaagctggtggag
ccctccaagaagctccaggagaacatctgctctcgtcatgatgaggtgatgaagatgttc
tgccgtactgatcagcaaagtatctgttatctctgccctgtggatgaacataaaggccac
gacacagtctcagctgcagcagaaaggactgagaggcagagagagctggaggtgagtcga
caaaacatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaacatgat
gtggaggccatcaatcagtctgctgatcaaacagtggagcacagtgagaagatcttcact
gagctgatccatctcatccagaaaagaagctctgatgtgaagcagcagatcagatcccag
caggaaactgaagtgagtcgagtcaaaaagcttgaggagaagctggagcaggagatcact
gagctgaagaggaaagatgctgagctgaagcagctctcacacacagaggatgacatccag
tttctacacaactacccctcactgtcagcactcagtgagtctacagactcatccagcatc
aatatccgtcctctgagctactttgaggatgtgacagcagctgtgtcagaggtcagagat
aaactacaggacattctgagagaggaatggacaaacatctcactgacagtcactgaagtg
gatgttttactgtcacaaccagagccaaagaccagagctggattcttaaaatattcatgt
gaaatcacactggatccaaacacagcaaacacacagctgttattatcacaggggaacaga
aaagtaacattaatggaacaacagtcttattctgatcatccagacagattcactggatgg
tttcaggtcctgagtagagagagtctgactggacgttgttactgggaggtggagtggaga
gggggaggagttgatgtagcagttgcatacaagaatatcagcagagcagggagtgtgaat
gaatgtagatttggacttaatgacaaatcttggtcattagattgtaacaacaacagttat
acatttttgtacaacaacatccaaactcctgtctcaggtcctcgttcctccagagtagga
gtgtacctggatcacagagcaggtattttgtccttctacagcgtctctgaaaccatgact
ctcctccacagagtccagaccacattcactcagccgctctatgctggactttggctttac
tattatggagactgctga
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integrated database retrieval system
