Octopus bimaculoides (California two-spot octopus): 106869362
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Entry
106869362 CDS
T04127
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106869362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obi03041
]
106869362
Enzymes [BR:
obi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106869362
Spliceosome [BR:
obi03041
]
Complex A
U2 snRNP components
U2 related factors
106869362
Complex B
106869362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
PH_10
Motif
Other DBs
NCBI-GeneID:
106869362
NCBI-ProteinID:
XP_014770570
EnsemblRapid:
LOC106869362
LinkDB
All DBs
Position
6:complement(31543296..31576281)
Genome browser
AA seq
1033 aa
AA seq
DB search
MPSRSYRRRSRSRSHERRHRSRSRSPDRSRRSRRSRSRERKRSHSRDRDRRSRSRDRYAR
RSRPSSRERRREKHSPRKRSSSRNRSRSRSKSLPKAAPSRSPSVEKISPKETEVKVKEEP
VDKGGKVDPIVYGNPSGLGGPEGQEEEQKRLELEMQKRRERIEKWRAERKKKQELIPINI
ALPSKKWSLEDDDDDDEEEEKKDINGANDEIDPLDAYMMSVNEEVKQIRDKNSDKTQDNA
PKAESGPSVNNAQNKVTMIKAVVKKKEDTSKLKGELMENNVDAMEYSSEEEEEDLDVTMA
GMVKKKKELTLVDHTRIYYAPFRKNFYVEVPEIARMTQVEVEELRLDLEGIKVHGKGCPK
TIRTWAQCGVSKKIMDALKKHGYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTVAFLLP
MFRHIMDQGPLEEGDGPISVIMTPTRELAMQITSECRKFTKSLGLRAVCVYGGTGISEQI
AELKRGCEIIVCTPGRMIDMLAANNGRVTNLRRCTYVVLDEADRMFDMGFEPQVMRIVDN
IRPDRQLVMFSATFPRQMEALARHILTKPIEVQVGGRSVVCKDVEQHVILLDEDQKFFKL
LELLGIYQELGSVLVFVDKQEHADEVMKELLKHAYPCMSLHGGIDQYDRDSTILDFKNGT
IKLLVATSVAARGLDVKHLILVINYDCPNHYEDYVHRCGRTGRAGNKGFAFTFITPDQEK
YSIDIIKALELSGAPVPPDLEKMWNDYKERAKAAGKIIKSSSGFKGKGFKFDESEAQLAD
DRKKQQKAALGLQDSDEEDAGFDIEQHIEDMFASRKKVTDVTKPVVPVPMQQQQQQQQQQ
ASQTNVTNQQKLELAKRVAARINIAKKLGPESQDIIQQAASAILKGGGVSAPQVASKTIA
EQTAEKINAKLGYRPAAEEEKEGQEQSTETFKRYEEELEINDFPQTARWKVTSKEALAQI
CEYSEAGITVRGTFIPTGKEPKEGERKLYLAIEATNELAVQKAKKEITRLIKDELVRLQN
SYQPTSKGRYKVL
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgcctagcagatcctacagacgccgatctcgcagtcggtctcacgagcgaagacaccgc
agtcgttcccggagccctgacaggtctcgccgttctcgaaggtcaagatctcgtgagaga
aaacgttcgcacagtcgtgacagagaccgaaggagccgatctcgagatagatatgctcgt
cgctctaggccttcgtcaagagaaagaaggagagagaagcattctcccagaaagaggtcg
tcatcaagaaatcgaagccgttctcgctccaagtctctccctaaagcagctcctagtcgt
tccccaagtgttgagaagattagtccaaaggaaacagaagtgaaagtaaaagaagaacct
gtggacaagggaggaaaagttgatcccatagtctatggaaacccttcggggttgggagga
ccggagggtcaggaggaagaacagaaacgtttggaactggagatgcaaaaacggcgagaa
cgaatcgagaaatggcgtgctgaaaggaaaaagaaacaagaactgattccaatcaacatt
gcactaccatcgaagaaatggagtcttgaagatgacgatgatgatgatgaagaagaagag
aagaaagatatcaatggagctaatgacgaaatagatcctcttgatgcctatatgatgagt
gtcaacgaagaagttaaacaaatccgagacaagaacagtgacaagactcaagataatgct
cccaaagctgaaagtgggccaagtgtcaacaatgcccagaataaagtgactatgattaaa
gctgttgtgaaaaagaaagaagataccagtaaactgaaaggggaactcatggagaataat
gttgatgcaatggagtattcctcagaggaagaagaagaagaccttgatgttacaatggct
ggaatggtgaaaaagaagaaagaactaacattggtggatcacacaagaatatattatgca
ccgttcagaaagaatttttacgttgaagtgccagaaatagcaagaatgactcaagttgaa
gtggaagagttgcgtcttgacttagaaggaattaaagtccacggaaaaggatgcccgaaa
acaatccgtacatgggcacagtgtggagttagtaagaaaattatggatgcattaaaaaaa
catggttatgagaaaccaacaccaatccaagctcaggctatccctgcaatcatgtctgga
agagatctaattggaattgccaagacaggcagcggtaaaacagtggcattcctgttgcca
atgttcaggcacatcatggatcagggaccccttgaggaaggtgatgggcctatatctgtg
attatgactcccactcgagagctggccatgcagattacatctgaatgtcgaaagtttacc
aaatcattagggctgcgtgctgtgtgtgtgtatggtggtactggtatctctgaacagatt
gcagaacttaagagaggatgcgaaatcattgtgtgtactcctggaagaatgattgatatg
ttagcagctaacaacggtcgtgtaacgaatctccgccggtgtacctatgtagtccttgat
gaagcagaccgtatgttcgatatgggctttgaaccacaggtgatgaggattgtggataac
attcgaccagatcgccagcttgttatgttctcagctacatttccccgacaaatggaggca
ctggcccggcacatcctcacaaaacctattgaagtacaagttggaggtcgtagtgttgta
tgtaaagacgttgaacaacatgttatacttttagatgaagatcagaaatttttcaagcta
ctcgaactgctgggtatataccaggaacttggcagtgtactggtgtttgtcgacaaacag
gaacatgctgacgaagtgatgaaagaacttctgaaacatgcctacccttgcatgtcatta
catggtggaatcgaccaatatgatcgagacagtaccattcttgacttcaaaaatggaaca
atcaagttgttggttgctacctctgttgctgccaggggtttagatgtgaaacatttaatt
ttggttatcaactacgactgtccaaatcactatgaagattatgttcatcgctgtgggcgt
acaggccgtgctggaaacaaagggtttgcttttactttcataacaccagatcaagaaaaa
tattccatagacattatcaaagcattagaactttccggagctccagtaccacctgatctg
gagaaaatgtggaatgattacaaagaaagagctaaagcagctgggaagattataaaaagc
tccagtggttttaaaggcaagggtttcaagtttgacgaaagtgaagctcagttggccgat
gaccgcaagaaacaacagaaagctgcccttggcttacaagactctgatgaagaagatgct
ggctttgatattgagcagcatatcgaagacatgtttgccagccgtaagaaagtcactgat
gtcaccaaacctgtcgtaccagtcccaatgcagcaacagcaacaacaacagcagcaacag
gccagtcagacgaacgtcactaaccaacagaagctagagttggctaaacgtgtagccgca
aggatcaacatagccaagaaactgggaccagaatcacaagatattattcaacaagctgcc
tctgccatcctgaaaggaggcggagtttctgcacctcaggttgcttcaaagacaattgcc
gagcagacagctgagaagatcaatgctaagcttggctaccgaccagcagctgaggaagag
aaagagggacaagaacaaagcacggagacattcaagcgctatgaagaggaactggaaata
aatgatttcccacagacagcacgttggaaggtcacatcaaaggaagctcttgcccaaatc
tgtgaatattctgaagcaggtataacggtgagaggaaccttcatcccaactggaaaagaa
cccaaagaaggagaacgtaaactctacctggctattgaggctactaatgaactagctgta
cagaaagccaagaaggagatcactcgattaattaaagatgaattggtcagattgcaaaac
tcataccaaccaacaagtaaaggccgatataaagtactgtaa
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integrated database retrieval system
