Octopus bimaculoides (California two-spot octopus): 106870134
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Entry
106870134 CDS
T04127
Name
(RefSeq) cholesterol transporter ABCA5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
106870134
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
obi02000
]
106870134
Transporters [BR:
obi02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
106870134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
SMC_N
AAA_23
RsgA_GTPase
SRP54
AAA_15
AAA_22
TsaE
AAA_29
nSTAND3
ABC2_membrane
SbcC_Walker_B
Rad17
DO-GTPase2
DLIC
Motif
Other DBs
NCBI-GeneID:
106870134
NCBI-ProteinID:
XP_052830945
EnsemblRapid:
LOC106870134
LinkDB
All DBs
Position
20:45163282..45220393
Genome browser
AA seq
1657 aa
AA seq
DB search
MANLFMTQLRMLIKRNFYIRIREKKMLIMDIISPVIYMVALIAIMKLVRPKVLPAMPISK
PAPVTPAEFENILYTPNTNETRTIIESLNQTIGKNTSYTPADNIDDMVQKYKELQGKTVG
VVFDNLNSSTKVTYSLRFPDSMVPDKTTGVFVDEDQCPALGECQATKYVSSGYIFLQNTL
DGILSEKLNPNINLTSPIMLMQMMPKRVFHQNPTTILSLTSIYFIVAFLSFINSLCTHLV
VEKEKKIRPTMQAMGLQETAFWLSWAIVQYFFTTCVVVISTIIIVAINVLPNSNVFLFFL
ALMFFTLTLITLSFLMSTFFKKSQMAMTLPAFYIFLVTLIYLAVGLTRTYSASAGLIYTT
PLWAMVLLCLVSPIAFALYVDNVSNILLYITMTIIKISIIVVIIINVIIVIIIVIIIIVV
IIVSVVLTFYLSGDFKRAMHPCFCLFPSYWRKSKIKSGIDNPNFDMEFNVDIKENVERVP
QEFDSKVGIRIMRLFKSFKTTKETITAVDNISLNLYEDEITCLLGHNGAGKTTLINMLAG
FLKPDSGHAMIYGYDVANADNLDQLKTMIGLCPQENIIHDHLTCKENLRTFAALKGFSAA
EIEDEVDSLLKDLNLTEKADVFSKNLSGGQKRKLSVGMAFIGRPKIIFLDEPTAGVDPLS
RRNMWELLKKYKKNHCILLTTHFMDEADILSDRKAIISKGKLQCYGSSLFLKYNYGIGYH
LNIHLTTSMFTSSPHPEDKINSILMILFSDILRSLEEKENGVTKAENLGIKSYGVSMTTL
EDVFFQIGQEETVKESSEEPDDSNELAPMANAASVPHVNYVKNANFQRYTGLLKVFFFNH
VRHPLFVVFGMLLPNLLVLVSILLNKYMDSSDNENKPVQLDITSLLYDYAGLAQSSTKPQ
FLIYNTTTADADINNVTEHIGHVVSINRTNVDLLTVAPHYIGSNFHWVSNQTLAADQLAN
TAIFNSTAVHAIPTIANFITNTLLNMGGNLPVFNISTNNWPWPKLRNTAAVSGKTFATVY
VLSFAFLVLSNGAGIQVVKDYEFNIRSQLRVSGISNSIYWAAKRTLDLGNALIPVIFLLI
IILAFQVDNLNSAGSIICLMLICFTYTACNQQFSYILSYAFKNFESCQSVSPNLSSTRDS
STQTKASLIGVRELSIKTTLTAPDCFCHRCNISSSFCSLCCLLFFFTFISISFLMQVQMN
YNFENKTVDVAAPIEDFFKWDNMVLYSILITIFHLIWMPFLINALDIWKATGKLRLAFGL
KPLPISYDALNDSTAEENEDVLEERQRVDNIVKKKEFPMATVQKISKIFGQPDHLCFKSK
KAHKNMKVAVNDVSFCVKGGEVLGLLGPNGAGKTTCISMMSGELGIDKGKIFIRDQNREE
EFFSEIIGFCPQHDALFPLSTLREQIQCYAEIRGICKEDINTIVDYYLETMNIKEHANNY
TSKLSGGTKRKTSYIMSMIGNPHFVLFDEPSTGMDPKSKRFMWDIISSNFQDSSKGAILT
THYMEEADTLCSRVAIIVNGRVQCVGSTQQLKEKYGQGYQLEVKLNVENQSDIDKSFKKL
EDHLLTLFPSMTTAEAITERRTYKIPSNEAAPLSESFAMLQEGNFKRFLSLPMSVCLFII
SFKSFCFVIFVQYAYGSFLTLKRQTSHDTATPRYLEI
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atggctaatttgtttatgacacagcttcggatgttgataaaaagaaatttctatataaga
attcgtgaaaagaaaatgcttattatggatattatctctcctgtcatttacatggtggct
ctaattgctatcatgaaattggttcggccgaaagttcttccggcgatgccaatttcaaaa
ccagctccagtcacaccggcagaattcgagaatattctatacacgccaaacacgaatgaa
acaagaactatcatagaaagccttaaccagacaattgggaagaatacaagttatactccc
gcggataacatcgatgatatggtgcagaaatataaagagctacaaggcaaaacagtggga
gtagtgtttgataacctcaacagcagtaccaaagttacgtattctctccgctttcccgat
agcatggtcccagataaaacgactggtgtatttgtcgatgaagatcaatgcccggcgttg
ggagaatgtcaagcgactaaatatgtgtcttcaggctatatctttctacagaatacttta
gatggaattctatcagagaaattgaacccaaacattaacctgacgtctcctataatgttg
atgcagatgatgccaaagagggttttccaccaaaaccccaccacaatccttagtcttaca
tcaatctattttattgtcgcttttctcagcttcatcaattccctctgtactcatctggtt
gttgagaaagagaagaaaatccgacccacaatgcaagcgatgggcttacaggaaacggca
ttttggttgtcgtgggccattgtacaatactttttcaccacctgcgtggtggtcatctcc
accatcatcatcgtggctatcaatgtcttaccaaacagcaacgtctttctcttcttctta
gccctcatgttcttcacgttgacccttatcacgctctctttcctaatgtcaacttttttc
aagaaatcccaaatggcaatgacattgcctgcattctacattttcttggttacgttgatc
tacctcgctgttggactgacaagaacctacagcgcatcggctggtttgatctacacaaca
ccattgtgggcgatggtgctgctctgtctcgtgtcacccattgcattcgctctgtatgtt
gacaacgtaagtaatattctactgtatatcaccatgaccatcatcaagatctcgatcatc
gtcgtcatcatcatcaatgtcatcatcgtcatcatcattgtcatcatcatcatcgtcgtc
atcatcgtcagtgtcgtcctcactttttatttgtcaggtgacttcaaacgcgccatgcat
ccgtgtttctgtctgttcccatcgtattggaggaaatcgaagattaaatctggaattgac
aatccaaactttgacatggaattcaacgtagatatcaaagaaaatgttgaaagagtacca
caagaattcgactcgaaagttggaattagaattatgcgccttttcaagagtttcaaaact
accaaagaaacaataacagctgttgataacatcagtttgaatctgtacgaagacgagatc
acatgtttgttaggtcacaatggcgctggcaaaacgaccctcataaatatgttagcaggt
tttctgaaacctgattctggtcatgccatgatatatggatatgatgttgctaatgctgac
aaccttgaccaacttaaaacaatgatcggattgtgtccccaggaaaacataatccacgat
catctgacatgtaaagaaaacctaagaacctttgctgcattgaaagggttttcagcagca
gaaatcgaagatgaggttgattcactgctgaaagatttgaatcttacggaaaaagccgac
gtgttttcaaagaatctcagtggaggacaaaagcgtaagctttctgttggaatggctttc
atcggaagaccaaagataatatttcttgatgaacctacagctggagttgatcccttgtcc
cgaaggaacatgtgggaactattgaagaaatacaagaaaaaccactgcattctattgacc
actcactttatggacgaagctgatatcctttcagatcgaaaagccatcatcagcaagggg
aagctccagtgttatggttcgtctctattcctgaaatataactatggaataggataccat
ttgaacattcatctcacgacatcaatgtttacatcttccccgcaccctgaggacaaaata
aatagcattttaatgattctattttcagatatactacgatctctagaagaaaaagaaaac
ggcgtcacgaaagccgaaaatctcggcatcaaaagctatggcgtttctatgacaacactt
gaagatgttttcttccaaattggtcaagaagagacagtaaaagaaagtagtgaagagccg
gatgacagcaacgagcttgcacctatggccaatgcggcatctgtgcctcatgtgaattac
gtgaaaaatgctaattttcaaagatataccggtcttttgaaagtgtttttttttaatcat
gtaagacatccactgtttgtagtatttggaatgttgttaccaaacctccttgttcttgta
agtattctgctcaacaaatatatggattccagcgataacgaaaacaagcccgtccaactc
gacatcacatctttgctttatgactacgccggcttagcgcaatcatcgacaaaaccgcaa
tttttaatttacaatacaacgactgctgatgcagacataaacaatgtgaccgaacacatc
ggtcacgtggtctccatcaaccgaactaacgttgatcttcttacagtggcccctcactat
atcggaagcaatttccattgggtttcaaatcaaacgcttgcggcagatcaactcgcaaac
acagccatctttaattccacagcagtccatgctattccaacaattgccaattttattaca
aatactctgctgaatatgggaggaaatttaccagtcttcaacatcagcaccaacaattgg
ccgtggccaaaattaagaaatactgctgccgtcagtggtaaaactttcgcaacggtctac
gttttatcatttgcattccttgttttatcgaatggagctggaatacaggttgtaaaagac
tatgagtttaatatccgaagccaactccgagtgtcaggaatatcaaattccatctactgg
gctgccaaaagaactcttgatctgggcaatgctctgatacccgtaatctttcttctaatt
ataattcttgctttccaggttgacaacctaaacagtgctgggtcgatcatctgtttgatg
ctcatatgtttcacgtacaccgcgtgcaaccaacaattcagctacatcttatcttacgcg
tttaagaattttgaaagctgtcagtccgtttcaccgaatttatcctcaacgagagatagt
tcaacacagacgaaagcgtcattgattggtgtcagagagcttagcataaaaaccacgttg
actgcacctgactgtttctgccaccgctgtaatatatcttcgtcattttgttctttgtgt
tgtttgttatttttcttcacatttatttcgatttcttttcttatgcaggttcaaatgaat
tacaactttgaaaataaaacggtcgatgtggcggccccgatagaagactttttcaaatgg
gataatatggttttatactccatactcattacgatatttcaccttatatggatgccgttt
ctgataaacgctttagatatatggaaagccactgggaaacttaggctagcgtttggtttg
aagccacttccgatctcgtacgacgcattgaatgatagcacggctgaggaaaatgaagat
gttttggaagaaagacaacgcgtggacaacatagttaagaagaaagagtttccaatggct
acagtgcagaaaatcagcaagatcttcggccaacccgatcatttatgctttaaaagtaag
aaagcacacaagaacatgaaagtggccgtgaatgacgttagcttttgcgtaaagggcgga
gaagttctcggtcttttgggaccgaacggtgctggtaagaccacatgcatttccatgatg
tcaggcgaattgggaattgacaaaggaaagatattcatccgagatcaaaaccgcgaggaa
gagtttttcagtgagataattgggttttgccctcaacacgatgctttgttccctctgtca
accctcagggaacaaatccagtgttatgctgaaatacgggggatttgcaaagaggatatt
aatactattgtggattattatttagaaacgatgaatatcaaagaacacgccaataattac
acatctaaattgtctggtggaaccaaacggaagacaagttatatcatgagcatgataggt
aatccacattttgtcttgtttgatgaaccttcgactggaatggacccgaaatcaaaacgt
tttatgtgggacatcattagttctaacttccaagattcttcaaaaggagccattttaacc
acccactacatggaggaagcagatactctttgttcgagagttgccattattgtcaatgga
agagtgcaatgtgtcggctccacacaacaactgaaagagaaatacggtcagggatatcaa
ctggaagtgaaactaaacgtagaaaaccaatcagacatcgacaaaagtttcaagaaactg
gaagaccatttgcttacattgttcccgtcaatgacaacagccgaagccattacagaacga
aggacgtacaaaatcccctcaaacgaagctgcgccgttatcggagtcatttgctatgtta
caagaaggtaattttaagcgttttctctcactccctatgtctgtctgtctgtttatcatt
tcttttaaatcattttgttttgtgatttttgttcagtatgcttatgggtctttcttgact
ctaaagaggcaaacatcacatgatacggccacacccaggtatctggagatttaa
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