Octopus bimaculoides (California two-spot octopus): 106872135
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Entry
106872135 CDS
T04127
Name
(RefSeq) ras-related protein Rab-39B
KO
K07925
Ras-related protein Rab-39B
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
106872135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obi04131
]
106872135
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
obi04031
]
106872135
Membrane trafficking [BR:
obi04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
106872135
GTP-binding proteins [BR:
obi04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
106872135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
RsgA_GTPase
Cyclase
Motif
Other DBs
NCBI-GeneID:
106872135
NCBI-ProteinID:
XP_014774493
EnsemblRapid:
LOC106872135
UniProt:
A0A0L8HA65
LinkDB
All DBs
Position
2:complement(150402129..150439395)
Genome browser
AA seq
214 aa
AA seq
DB search
MVEPIFEYQFRLILIGDSTVGKSSLLKYFTDGKFAEVCDPTVGVDFYARLIEVRPGIRVK
LQLWDTAGQERFRSITRSYYRNSVGALIVYDITKRSSFEHLEDWLKESQLHIEPHKAVYL
IVGHKSDKDNERKVTTREGRQFAEYHGLRFLETSAKTGTNVEEAFLVVARDIYQMLEEGK
ITVEEGWDGVKNGFARPKETLHLVEGEPEGGGCC
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaccaatattcgagtaccagtttcgtctaatactgattggagacagcacagtt
ggtaaatcttcactgctcaaatactttactgatggtaaatttgctgaggtgtgtgacccg
accgttggggtggatttttatgctcgcttaatcgaagttcgacccggcatccgtgtgaag
ttgcagttatgggatacagctggccaggaacgattcagatccataacaagatcttactac
cgaaactctgttggagctttaatagtttatgacataacaaaacgcagtagttttgaacac
ttggaggattggttgaaagagtcgcagttgcatatagaaccacataaggctgtttatctg
attgttggccacaaatcagataaggataatgaacgtaaagtgacaacccgggaaggacgt
caatttgctgaatatcatggactaagatttttagagacttccgccaaaactggtacaaat
gtggaagaagcctttctagttgttgctagagacatatatcaaatgttagaagaaggtaaa
attacagttgaagaaggctgggacggtgtgaaaaatggttttgctcgacccaaagagact
ttacatttagtagagggtgaaccagaaggtggaggttgctgttga
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integrated database retrieval system
