Octopus bimaculoides (California two-spot octopus): 106872740
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Entry
106872740 CDS
T04127
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-B isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Pathway
obi03013
Nucleocytoplasmic transport
obi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106872740
03015 mRNA surveillance pathway
106872740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obi03019
]
106872740
Messenger RNA biogenesis [BR:
obi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106872740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FMP27-BLTP2_C
RRM_occluded
RRM_5
RRM_7
RRM_3
Motif
Other DBs
NCBI-GeneID:
106872740
NCBI-ProteinID:
XP_014775309
EnsemblRapid:
LOC106872740
UniProt:
A0A0L8H5L1
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All DBs
Position
2:complement(27676990..27692261)
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AA seq
333 aa
AA seq
DB search
MTRSTLTREKKKTSSGNASGGGGGGGGGGSGGGGGGGSGSTTAAATTERGRDKKRRSVSS
SSTSSSGSSGSSSGSSSSSRSRSRSSSSSSGSSSSGSSSSSSSSSVSTSRSSSSSSSRSS
HSRSSAVGRGASNRHKSLSPRRKKQRSPTPKTAKVHIGKLTRNVSKDHIMEIFSVYGSIR
HIEMPTDRIHPNFSRGFAYVEYENAAEAEKAIKYMDGAQIDGQEITAAAVLAPRPTRVIP
RRSPIRRLPPRWRPSPPRFRDRRRKDFAKVLTNNFKSSRFQPSWKMANIRQQTQLSRSPP
PPPRRRSPPRRRTRSRSPARRRRYSRSSSSSSR
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaagtacattaactagagaaaagaaaaagacaagcagtggtaatgctagtgga
ggaggaggaggaggtggtggtggcggcagcggtggtggaggtggtggtgggtctgggagt
actacggcagctgcaacgactgagcggggtcgtgacaaaaaaagacgcagtgtttcttcc
agtagtacgagtagtagtggcagctcaggaagttcaagtggaagtagtagttcatctcgt
agcaggtcacgctcatcatcatcttccagtggatcgagttcatctggcagcagcagcagc
agcagtagcagcagtgtgagcacctctcgttcctctagctcaagttccagcagatcttca
catagtcgttcttcagcagttggacgaggtgccagcaacagacataaatctttatctcca
agaaggaaaaaacaacgtagccccactcccaaaactgctaaagtacatattggcaaatta
actcgtaatgtctccaaggatcatattatggaaattttctctgtatatggtagtataaga
catatagagatgcctacagatcggattcatccaaatttttctcgtggttttgcatatgtt
gaatatgaaaatgcagctgaagcagaaaaagccattaagtacatggatggtgctcaaatt
gatggccaagaaattacagcagctgctgtacttgcacctagacctactagagtgatccct
cgtcgtagtcctatacgtagactacctccacgatggcgtccatctcctccgagattcaga
gataggcgcagaaaagactttgctaaggttttaacaaacaacttcaaatcaagccgattt
caaccaagctggaagatggccaacatcagacagcagacacagctatccaggtctcctccc
ccgcctccaagacgacgttctcctccaagacggcgcactcggtccagatctcctgctagg
cgacggcggtatagtcgctctagctctagttcttcaagatga
DBGET
integrated database retrieval system
