Octopus bimaculoides (California two-spot octopus): 106879034
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Entry
106879034 CDS
T04127
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
obi
Octopus bimaculoides (California two-spot octopus)
Brite
KEGG Orthology (KO) [BR:
obi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
obi01002
]
106879034
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obi04121
]
106879034
Enzymes [BR:
obi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
106879034
Peptidases and inhibitors [BR:
obi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
106879034
Ubiquitin system [BR:
obi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
106879034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
106879034
NCBI-ProteinID:
XP_014783924
EnsemblRapid:
LOC106879034
UniProt:
A0A0L8G5C3
LinkDB
All DBs
Position
1:71696418..71786742
Genome browser
AA seq
1492 aa
AA seq
DB search
MVTGDNRQLLPADDVCMATNNTIVCIIRDLVDKKNPRKKRKFYLPASKKVADMIQEVADT
CGYNANTISMNYEKPSVSGYYDVKGVLDKNSTQTLGSLYNEDLCNDDFCNDDIQILNFTI
YKSEKQTAMQATTEGCSNISLIIQKQETSDVPTSHGCETQDHVGSEVSPNYSCEVKEEIQ
ASSIDHGYYLSHHKSETGFVGLVNQAMTCYLNSLLQTLFMTPEFRNALYRWEFTGSKEEA
VKSIPYQLQKLFLTLQTSCKRAIETTDLTLSFGWDSSEVWHQHDVQELCRVMFDALEQNW
KQTDQAHLINHLYQGKLKDYVKCLQCSHESARIDAYLDIPLVIRPFGGSQVYGSVEDALA
AFVQPETLAGSNQYFCEKCGRKCDAHKGLKFVSFPYLLTLQLKRFDFDCNTMHRIKLNHR
MTFPEVLDINHMIEEVDCNLSHSEGPLVEDIRHQAIKTMETNEHSQLGGDMSDEAIDEGI
EIETSTTATLTNSESSSLSSESATNDRNSKESDAKGPYVYELFSIMIHSGSAAGGHYYAY
IKSFKDGQWYSFNDQHVSKITYDDIRKTYGGSNTGRTYYSASYTSSTNAYMLMYRQIDKE
RNADFVSPEDFPPHMKAQLEELRSREENERKQQEIDKCTCKIKVFCYKPGTQVKMENKLE
VHKDKTLRETTEIAYNLFQLKDVASLDCCRLVKYDDYCEALEKSFENEENSPIEKLLGGV
KSTYTFDLLLEIRRPDQTFQEYKPGGVTIKVHLVDLESEIIHSPVTVRACNSNTVAEFKE
LVAKTLNVPVTHMRCCLELYSDLRLLTSPEETLKSENFFRCNKVFIEYSGSEDSDVTFTR
SKFYKLLDRHQNTIRIYMNIPSKMQVGDYKNYANYLPFSKNNSATSNGDDSPGSPVKNFK
NDYRKEEYTRDVISCCDDNSAYPAAVIGADGASGPHEIDGTTPIIRSNTSSTTKSKTYLP
LTTGSNIIHTKMQQLNFRLSKTGYTQSDSGNVVSYCTDDIASPSTGRESMDESPLNSPIV
DSMPVISPLTPNYRDDNSEDINNCNKFSSDITGWCTIPIPLGNMIMDDWASEISQSNIDV
IGPDRASRGGKEDLVTNDALNLESLEENCELNTSIQCEKDTDSICNHECIDKELDNEEYR
HYFEATENTDALGQRTLIVNVDKRITLEDFKKELEPYIGLSSENFKVFKVYSNNQEFEST
QLNENLSFLEDGKLNIKLGRALRPGEYRVKVYQLLVDEPEPCKFLIETIFAKRMSVLESK
KQILAELKEQCNLDIPLSRCRLRKKSWKNPGAVYLDNQLYDDDISLYTHWEIFLEVLEGP
DQVKSANELSLFARRWRTSTYRLDLFQEVVLSQHTTDHLREKLHEISGIEKENIEFAKAR
GTFPCDIPVLGIQTELDWNPQVTSFNMWPQAMCEPGSVIYYRDKTEDLMELSKEKKEELS
QKENRVTNLVHKISNSPRKERALKIYTEDLKSTRLLPSPVVPSAAGAASGLD
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atggtgactggagacaacaggcagctccttccagctgacgatgtgtgtatggctaccaat
aatacaatagtgtgcatcattagagatttggtagataagaagaatccaaggaagaaacgc
aaattttacctgccagcttctaaaaaggtagcagatatgatccaagaggtagcagatact
tgtggctacaatgccaatactatatctatgaattatgaaaaaccatcagtatctgggtat
tacgatgtaaagggagttttggataagaatagtacccagactttgggaagtctttataac
gaggatctctgtaatgatgacttttgcaatgatgacattcagattcttaattttaccatc
tataaatctgaaaagcaaacagccatgcaggcgacaactgaaggttgttctaatatatca
ttaatcatccaaaaacaagaaacttctgatgtaccaaccagtcatggatgtgaaacccag
gatcatgttggttctgaagtatcaccaaattacagttgtgaagttaaagaggaaatacaa
gccagctctatagaccacggttactatttgagtcatcacaaatcagaaactgggtttgtt
ggtcttgtaaaccaagctatgacctgttaccttaatagcctgttgcagactttattcatg
actccagaatttagaaatgccctgtacagatgggaatttactggcagcaaagaagaagct
gtaaagagtattccctatcagcttcagaaactatttttgactttacagactagttgtaaa
agagccattgaaaccactgatttgactctcagttttggttgggatagcagtgaagtgtgg
catcagcatgacgtgcaagaattatgtcgggtgatgtttgatgctcttgagcagaattgg
aaacagactgaccaagcacatctaattaaccacttataccaaggcaaactgaaagattat
gtcaaatgtctacagtgctctcatgagagtgctcgaatagatgcttatctggatatacca
cttgttattcgcccatttggtggcagtcaggtgtatggcagtgtggaagatgctttggca
gcttttgtacaaccagagacattggcaggatctaatcagtacttctgtgagaaatgtggc
cggaagtgtgatgctcacaagggcctcaaatttgtttctttcccttatctgctcaccttg
caactgaaacggtttgactttgactgcaatacaatgcatcggattaaattaaatcatcgg
atgacattccctgaagtcttggatattaatcacatgatagaagaggttgactgtaatctt
agtcattctgaagggcccttagttgaggatattagacatcaggccatcaaaaccatggaa
actaatgaacacagccaattgggtggagatatgtcagatgaagctattgatgaagggata
gaaattgaaaccagcacgactgccaccttaaccaacagtgagtcctctagtctaagcagt
gagtctgccactaatgacaggaatagtaaagaatctgatgccaagggaccatatgtttat
gaattattctccattatgatacattctggaagtgctgctggtggccattattatgcttac
ataaaatcctttaaagatggccaatggtacagtttcaatgaccagcatgtttcgaaaatc
acttatgatgatatccggaaaacctatggaggttcaaatacaggtcgtacttactattca
gcttcttacactagctctaccaatgcctacatgttaatgtaccggcaaatcgataaagaa
agaaatgcagattttgtttctccagaagatttcccaccacatatgaaagctcaattagaa
gagttaagatcaagagaagaaaatgaaaggaagcagcaagaaattgataaatgtacttgc
aagataaaagtcttttgttacaaaccaggcactcaagtgaaaatggaaaataaacttgag
gtgcacaaggataaaaccttacgagagacaacagaaattgcttataatttgtttcagttg
aaggatgtggcttctctggactgttgtcgattagtcaaatatgatgactattgtgaggct
ctagagaaatcatttgaaaacgaagaaaacagccccattgaaaagctactgggaggagtc
aagtcaacttacacatttgatctactattagagatacggcgccctgaccaaacatttcaa
gagtataaaccaggtggtgtgacaataaaggttcatttggtagatcttgaatctgaaatc
atccactcaccagtcacagtgcgagcttgtaatagcaatacagtagctgagttcaaagaa
cttgttgcaaaaacattaaatgttcctgtgacccatatgcgctgctgtctggaactttac
tcagatcttcgattgcttacctcacctgaagaaactctgaagtcagaaaattttttccgt
tgcaataaagttttcatagaatattcaggtagtgaagattctgatgtgacttttacaaga
agtaaattctacaagttactagatagacatcaaaacaccattcgaatttacatgaatata
ccatccaaaatgcaagttggagactataagaactatgccaactatttgccattctcaaaa
aataattctgctaccagcaacggtgatgattctcctggatctcctgtaaagaacttcaag
aacgattatagaaaagaagagtatacaagagacgtaatttcttgctgtgatgacaattcg
gcttatcctgctgctgtgattggtgctgatggagcgtctggccctcatgaaattgatggc
accactccaatcatcagatcaaatacctcttctacaacgaaatcaaagacatatttacca
ttaactacaggaagcaatataatacacacaaaaatgcagcaattaaacttccgtctttcg
aaaacaggttacacacaaagtgatagtggtaatgttgtgtcttattgtactgatgacatt
gctagtccttccacaggccgggaatcaatggatgaaagtccattaaattccccgatagtt
gatagcatgccagttattagtccattaactccaaattacagagatgataactctgaggac
ataaataattgcaataagttttcttctgatattactggatggtgcacaatacccatccct
ctgggaaacatgattatggatgactgggccagtgaaattagccaaagcaatattgatgtt
ataggccctgatagagccagcaggggtggtaaagaagacttagttaccaatgatgcttta
aatttagagtcactagaagagaattgtgaactgaacacatcaattcaatgtgaaaaagat
actgatagcatttgtaaccatgaatgtattgataaagaattggacaatgaggaatacaga
cactattttgaagcaacagaaaatacagatgctcttggtcaaagaactttgattgtgaat
gtcgataaaagaataactctggaggatttcaagaaagaattggaaccatacattggatta
tcttctgaaaattttaaagttttcaaagtttactctaacaatcaagaatttgaaagtacg
caactgaatgagaatttgtcatttcttgaagatggaaagctgaatatcaaattaggtcgt
gccttacggcctggcgagtatcgtgtaaaagtttatcagttattggtagatgaacctgag
ccttgtaaatttctcattgaaacaatatttgctaagcggatgagtgtccttgaatctaag
aagcaaatattagctgaacttaaagagcagtgcaatttagacatacctctttcaagatgc
cgtttacgaaagaaatcttggaaaaatcctggtgcagtttatttagacaatcaattatat
gatgatgacatttcattatatactcactgggaaatttttctggaagttttggaaggcccc
gatcaagttaaatctgctaatgaactatcactatttgcacggcgatggcggacatctact
tatcggttggatctcttccaagaagttgttttatcacaacatacaacagaccatctacga
gagaaattacatgaaattagtggtatagagaaagaaaatattgaatttgccaaggcacgt
ggcacattcccttgtgatattcctgtgttggggattcaaactgaattggactggaatcct
caggttacctcctttaatatgtggccccaagcaatgtgtgaaccaggaagtgtaatatat
tacagagataaaacagaagatttaatggaactgtccaaagaaaaaaaggaggaactatct
cagaaagaaaacagggtaaccaacctggtgcataagatctccaattctcccaggaaagaa
cgagctttgaaaatttacactgaagatttaaaatcgaccagacttttgccatctcctgta
gttccctctgctgctggtgcagcttctgggctagactag
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integrated database retrieval system
