Ooceraea biroi (clonal raider ant): 105276825
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Entry
105276825 CDS
T05778
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03022
Basal transcription factors
obo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105276825
09124 Replication and repair
03420 Nucleotide excision repair
105276825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obo03021
]
105276825
03400 DNA repair and recombination proteins [BR:
obo03400
]
105276825
Transcription machinery [BR:
obo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
105276825
DNA repair and recombination proteins [BR:
obo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
105276825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
DZR
Motif
Other DBs
NCBI-GeneID:
105276825
NCBI-ProteinID:
XP_011333059
LinkDB
All DBs
Position
6:complement(13325876..13328502)
Genome browser
AA seq
401 aa
AA seq
DB search
MAEEELEEKEYRWETGYEKTWEAIKEDDHGLLEASVADIIHNAKRKRQLERKQGSRLGMM
RHLYIILDSSESMSNQDLKPTRFLCSLKLLEDFIEEFFYQNPISQLGIITTRNKRAEKIS
DLAGNSRKHVKELQALQQTVLTGEPSLQNSLELATNSLKLLPSHASKEILIIIGALTTCD
PGDINETIRNMKSDGIRCSVIGLAAELYICKRMANATGGEHGVALDDKHYKEQLNAHVDP
PPAAMRLDAALVKMGFPHHALHSSASDTSMTVCMCHADSSDESVKFMSTGYLCPQCLSKH
CELPVECRACGLTLVSAPHLARSYHYLFPVGPFKEVTYEGDHSLCFGCQKAFSQKDKKIY
ICGKCNQTFCLDCEIFIHEILHTCPGCAANSEMYKNSTDKS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggaagaactcgaagaaaaggaatatcgttgggaaaccggctatgagaaaaca
tgggaagctatcaaagaagatgatcatggattactagaagcatctgtcgcggacattatt
cacaatgccaaaaggaagcgtcaactggaaaggaaacagggctccagattaggaatgatg
agacatctttatatcatcttggattcctctgaatcaatgtcgaatcaagatttgaagcca
acccgtttcctatgttccctgaagcttctggaggatttcatcgaagagtttttttatcaa
aatcctataagtcaattgggcataattacgactaggaacaaaagagctgagaaaattagc
gatttggctggtaattcaaggaagcacgttaaggaattgcaagccttacagcagactgta
ctgactggtgaaccatccctacaaaattctttagagttagcgacaaattcattgaagtta
ttgccctctcatgccagtaaagaaatattgataatcataggggctctcactacttgcgat
cctggagacatcaacgagacaatacgaaacatgaaatcagatggtattaggtgcagcgtg
atagggctagctgccgaactgtatatctgcaaacgaatggcaaatgctactggtggtgag
cacggtgttgcgctcgacgataaacattacaaggaacaattaaacgcgcacgtggaccca
ccgcctgctgcaatgcgattagacgcggcgcttgtgaaaatgggatttcctcatcacgct
ctacactctagtgcgtcagatacatctatgacggtgtgcatgtgccacgcagacagttct
gacgagtcagttaagtttatgagcactggctacctttgtccccagtgtctcagcaaacac
tgcgagctccctgtggaatgtcgagcttgcggtcttactttagtatctgctccacatttg
gcacgatcatatcattatttatttcccgttggacccttcaaagaggttacatacgagggt
gatcattctttgtgttttggttgccaaaaagcttttagtcagaaagacaaaaagatatac
atttgcggaaaatgtaatcaaacgttttgcttggactgcgagatatttattcacgaaatt
ttgcacacgtgccctggttgtgcagcaaattctgaaatgtacaaaaattctacagataaa
tcttaa
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