Ooceraea biroi (clonal raider ant): 105278444
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Entry
105278444 CDS
T05778
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105278444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obo03021
]
105278444
Transcription machinery [BR:
obo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
105278444
Prokaryotic type
Archaeal type
TFB
105278444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Cyclin_N
Cyclin_C
RB_B
Sigma70_r4
HcyBio
Motif
Other DBs
NCBI-GeneID:
105278444
NCBI-ProteinID:
XP_011335845
LinkDB
All DBs
Position
10:complement(2155138..2157929)
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AA seq
315 aa
AA seq
DB search
MASSSRYVADKVCCYAHPDAPLIEDYRAGDQICSECGLVVGDRVIDVGSEWRTFSNEKSG
IDPSRVGGPENPLLNGADLSTMIGPGTGAASFDGFGTAKYQNRRTMSSSDRALLNAFREI
NAMADRINLPKTIVDRANTLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEIC
AVSKISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPNMVQRAATHIARKAVE
IDIVPGRSPISVAAAAIYMASQASEDKRSQKEIGDIAGVADVTIRQSYKLMYPHASQLFP
EDFRFATPIDQLPQM
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggctagctcgtcacggtatgttgctgacaaagtatgctgctacgcacatccagatgct
ccacttatagaagattatagagcaggagaccaaatttgctcagaatgtgggttagttgtg
ggagatagagtaatagacgtgggttcagaatggaggacatttagcaacgagaaatcagga
atcgatccatctcgtgtcggtggtcctgagaatccacttcttaatggtgcagacctgtcc
acgatgattggaccaggaacaggtgctgcatccttcgacggctttggaactgctaaatat
caaaatcgtcgtacaatgagcagttctgacagagcattgctcaatgcgttccgcgagatc
aatgctatggcagatcgcatcaatttgccgaaaacaattgtggacagagccaacacattg
ttcaagcaagtacacgacggcaaaaatctgaagggtcgtgccaatgacgcaattgcttcc
gcgtgtttgtacatcgcctgtcgccaggaaggcgtgccacgcacgttcaaggaaatctgt
gcggtcagcaaaataagcaaaaaggagatcggccggtgcttcaaattgatcctcaaagcc
ctcgaaactagcgtggaccttattactaccggcgacttcatgtctagattttgttccaat
ctcggtcttcccaacatggtacaacgagccgctacacatattgctaggaaagcggtggag
atcgatattgtacctggaagatcgcccatttcggttgccgctgcagctatttacatggcg
tcacaggcatcggaggacaagagatcgcaaaaggagattggggacatcgccggtgtcgcg
gacgtcacaatccgacagtcgtacaaattaatgtatccgcatgcgagccagctcttcccg
gaagacttcagattcgccacaccgatcgatcagttaccgcaaatgtaa
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