Ooceraea biroi (clonal raider ant): 105283367
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Entry
105283367 CDS
T05778
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1 isoform X1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
105283367
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
obo01002
]
105283367
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obo04121
]
105283367
03400 DNA repair and recombination proteins [BR:
obo03400
]
105283367
Enzymes [BR:
obo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105283367
Peptidases and inhibitors [BR:
obo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105283367
Ubiquitin system [BR:
obo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105283367
DNA repair and recombination proteins [BR:
obo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
105283367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
105283367
NCBI-ProteinID:
XP_011344363
LinkDB
All DBs
Position
4:16673455..16677176
Genome browser
AA seq
675 aa
AA seq
DB search
MTVLEAEEDADKRSVPPRKKFCLSLSGRGRAIPIIAPQPPRASVRGGLLDRPDFSFDTSK
MLNGYRNQLSNHQDGGYDVSGTGTEGLKIATLCNLGNTCFLNSVLYTLRFAPSFLHNLHH
LATDLSNLNDKQLQTKAKSSSLGRTGVSLTSSGSRSWSSKDLLALAAPTADANKPRIQIA
TERLHELFMALRASEARENSEPYQPDAFLQALREVNPIFEGNQQQDAHELLVCLLDNIRE
TFQLLVRHRESQFGQGNGGFPADFIGDTGVSAADAQSAESSSGSGKRSIRKSRKKKKITS
RGSSAVCLVQSNANGVASATSARPYENGHAEFVDSNGETGMRKPESKKCFISEDFEGVSL
LRTTCLECEHVTERKETFCDICVPIDIDRSNEKDDDGRSVDSSEVYKRAVVTSELLWGRD
KYWCARCLRYNEARRAVCFPSLPRLLILQLKRFSTAAGSMEKINNHMPTPLTLQCFCEEC
SNEQTRGTAASSAPEARHVYRLYSVIMHQGATMTAGHYVAYARLPDESAYAEYFQCDRDN
NKRQNSGQGGTANANSSSIAISSCSSSSSSSTSSSSSSSSSSNSSSSDKASSILRYFRSK
PSVNNENKEQLVSKVGCRSMDCCGIRRNKQGVTWLECDDEAVHVIPLRELEDKLAPNPRN
SATPYLLFYVRSTTT
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgttagaggcagaggaagacgcagataaacgctcggttcctcccagaaagaag
ttttgcctgtccttgtccggtcgcggacgcgcgattcccatcattgctccgcagccccct
cgtgcgtcggtgagagggggccttttggatagaccagacttttcattcgataccagcaaa
atgttgaatggctatcgaaatcagctgagcaatcaccaggatggaggatacgacgtgtcc
ggtactggcacagaaggattaaaaatagccactttgtgtaatctagggaacacctgcttc
ctcaacagtgtactgtatactctgcgattcgcgccttccttcctgcacaatttacatcat
ctagccaccgacttgtccaacttgaatgacaaacagttgcaaacaaaagcaaaatcctcc
tcgttgggtagaaccggcgtatctttaacatcgagcggtagtcgcagttggagcagcaaa
gatctgctggccttggctgcaccgacagcggacgcgaataaacctcgtattcagatagcc
accgagaggttgcacgaactctttatggcgctacgtgcgtcggaggcgagggagaacagc
gaaccgtatcaaccggatgcctttttgcaagctctcagagaggtgaatccgattttcgag
ggaaatcagcaacaggatgcccacgaacttttggtctgcttgctcgacaacatcagagag
acgtttcagttgttggtcagacacagagagagccaatttggtcagggcaacggtggcttt
cccgcggattttatcggcgataccggcgtctcggcggcagacgcgcagtcggcggaaagc
agcagcggttccggcaagaggagcattcgtaaatctcgaaaaaagaaaaagattacgagc
aggggtagctccgccgtctgtctcgtgcagtcaaacgcgaacggcgtcgcgtcggcgaca
tccgcgagaccgtacgagaacggtcacgccgaatttgtcgacagtaacggcgagacgggg
atgcgcaagccggagagcaaaaagtgcttcatctccgaagactttgagggggtcagcctg
ttgcgtacgacgtgcctcgagtgcgaacacgtcaccgaacgcaaggaaaccttttgcgac
atatgcgtacctatcgacattgaccgttccaacgagaaagacgatgatggtcgatcggtg
gacagtagcgaggtgtacaaacgcgccgtggttaccagtgaactgctttggggtagagac
aagtactggtgcgcacgttgcctacggtacaacgaagctcgcagagccgtgtgtttcccc
tctttaccgaggctcctcatcttgcagctcaagagattttccaccgctgctggctcgatg
gagaagattaataatcacatgccgacgccgctcactttacaatgtttctgcgaggagtgc
agcaacgaacagacgcgcgggacggcagcgagtagcgcgccggaagcgcggcacgtttac
agactgtactcggtcataatgcatcagggtgcgacgatgaccgccgggcattacgtcgct
tacgcgcgtctaccggacgagtccgcgtacgcggaatattttcaatgcgatcgcgacaac
aacaagcgacagaattcgggccagggtggtaccgcgaacgcgaattcctcgtccatagcc
atctcctcttgctcctcctcctcttcttcctccacctcctcctcctcctcttcctcgtca
tcttccaactcttcctcgtccgacaaagcgtcaagtatactcaggtatttcaggagtaaa
cccagcgtgaacaatgaaaacaaggagcagttggtgagcaaagtcggatgtcgtagcatg
gattgttgcggcatcaggcgtaacaagcagggcgtcacctggctcgagtgtgacgacgaa
gcggtgcacgtgataccgctgcgggagctcgaggacaaactggcgccgaatccgcgcaac
tcggctaccccgtatctcctgttctacgtgagatcaaccacgacgtaa
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