Ooceraea biroi (clonal raider ant): 105284654
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Entry
105284654 CDS
T05778
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105284654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obo03041
]
105284654
Spliceosome [BR:
obo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105284654
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
105284654
NCBI-ProteinID:
XP_011346628
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All DBs
Position
9:complement(9394476..9397030)
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AA seq
489 aa
AA seq
DB search
MSLADELLADLEENDDADAFEEEPEPNFIPASVSKSLEEEIKVSSVRELAKLCDSERLQK
VMIEIDKHSKTPRKSADIVGPVESDPEYQLIVEANNMTVDVDNEIAVIHRFTRDKYSKRF
PELESLVVGPLEYVMTVRELGNDLDRAKNNETLQQFLTQATIMVVSVTASTTQGQLLTED
EKNAICEACDMAVELNNCKLKIFEYVESRMAFIAPNLSIIVGASTAAKIIGVAGGLTKLS
NIPSCNLLVLGSQKTTLSGFSQVATLPHTGFIYYSDIVQDTSPDLRRKAAKLVATKSTLA
ARVDARHEYADGHFGQVLREEIEKKLDKLQEPPPVKFVKPLPKPIDPGRKKRGGKRVRKM
KERYAITEFRKYANRMNFADIENDAYQEDLGYSRGTIGKAGAGRIRLPQVDEKTKVRISK
TLQKNLQKQQQWGGSTTVKKQVSGTASSVAFTPLQGLEIVNPQAAEKKVNETNAKYFSNT
AGFLKVKKS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagcggacgaacttcttgccgatctcgaggaaaatgacgacgcagatgctttt
gaggaagaaccggagccaaactttatcccggcttccgtttccaaatctttagaagaagaa
ataaaggtatcctctgtgcgagagttggctaagttatgtgactcggaacgattacagaag
gtgatgatagaaattgacaaacacagtaaaacacctaggaaatcagccgatattgtggga
ccggtagaatctgacccagaatatcagttaatcgtggaagctaataatatgaccgtagat
gttgacaatgagattgccgttatacatagatttactagagacaagtattcaaaacgattt
ccagagttggaatccttggtagtaggaccactggaatatgtaatgactgtaagggaatta
gggaatgatttggatagagccaaaaacaatgaaacattgcaacaatttttaactcaagct
acgattatggtcgtttccgtaacagcgtcaaccacacaaggccaactactgaccgaggac
gagaaaaatgccatttgcgaagcttgcgacatggcagtagaattgaataactgtaaacta
aaaatatttgaatacgtagaaagcagaatggcattcatcgcaccgaatctgtcaataatc
gtcggtgcatcaacagccgccaagattataggtgttgcgggcggtctgacaaagctctcc
aatatcccaagttgtaaccttttagtcttgggatctcaaaagactacgctgtctggattc
tcacaagtcgctacgttgcctcacacgggattcatatattattctgatatcgtgcaagac
acatctcctgacctacggaggaaagcagcaaagctagtagcgacgaagagcacgctagca
gccagagtggacgctcgccacgagtacgcggacggtcatttcggccaggtgttgcgcgaa
gagatcgagaagaagttggataagttgcaggagccgccgcccgtgaagttcgtgaagcct
ctgccgaagccgattgatcccggccgcaagaaacgcggtggtaaacgcgtgcgaaagatg
aaggagcgttacgcgatcaccgagttcaggaagtatgccaacaggatgaacttcgctgat
attgaaaatgatgcttatcaggaggaccttggttactcgcggggaacaattggcaaagcc
ggcgcaggtcgaatcagactgccacaggtcgatgagaagacgaaagtcaggatatccaaa
acgttacagaagaatttgcaaaagcaacaacaatggggaggaagcaccaccgtcaaaaag
caagtctctggcaccgcttcgagcgtggcattcactcctttacagggtcttgaaattgtc
aatccgcaagctgcagagaaaaaggtgaacgaaacaaacgcaaaatacttttcaaataca
gctggtttcctgaaggtcaagaaatcttga
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