Ooceraea biroi (clonal raider ant): 105287260
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Entry
105287260 CDS
T05778
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
obo01002
]
105287260
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obo04121
]
105287260
Enzymes [BR:
obo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105287260
Peptidases and inhibitors [BR:
obo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105287260
Ubiquitin system [BR:
obo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105287260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
105287260
NCBI-ProteinID:
XP_026830362
LinkDB
All DBs
Position
13:7295021..7318274
Genome browser
AA seq
1307 aa
AA seq
DB search
MVCRDGEKIQTCVVQFNMPFEANHKLYSDKLTLNVSTRVKDLYHYIEEHYHMRADSFKLL
LCTSSRSLIDLSDVKEQKTMEEIGVDFSGDSGLPENTKNTLYVVDPSQSFAIDATLPKTT
EYGVQGLPTFNFAGAPALQPHVWDEENIVREDVREDARDSREEVNFRSFIKTETSYVGLV
NQAMTCYLNSLLQALYMTPEFRNALYNWEYVDGSEKDEALSIPYQLQKLFLNLQTSTKSA
VETTSLTKSFGWDSTEAWQQHDIQELCRVMFDALEQKFKNTEQADLINRLYEGKMIDYVK
CLECGTEKSREDTFLDIPLPVKPYGSNVAYNSVEEAIRAFVQYETLEGTNQYHCEKCTKK
CDAHKGLKFTKFPYLLTLHLKRFDFDYKTYHRIKLNDKVTFPDTLNLNSFISSTTSQESP
GGDEDVGLGIKCDDSSTTDSGTLDDDCAPCDNSLSNSNHSTSHDQDDDEGIDMSNGPSTS
SCTTHNHENEKNRSACMLAKGPYIYELFSIMIHSGSASGGHYYAYIKDFRTQEWLCFNDQ
SVTQITHDDIQKTYGGGPPRTYYSGVYSSSTNAYMLMYRQIDRARNALPMQTQDFPTHIQ
ELLRKMKENEDNDRKNREKQMSIPRLKVYCHHPVEGKLMNIKLYVSPDITWAEATEQAYK
KFMLENVSLDQCRLVSYDHNTDMIECSYDDREHEPVRKIWRTSRRFDLLLEIRRKDQKFE
TYLAGGVATRVFVIDIAREEVIDGSIDIRGSLSQSVKDYKQTVGKIINMDPKQMKVIVQK
YPETRPVENDDSDLQTEGFYNANKIFITTMYDIDNNKAFQESTVYRVIENFRHVITLHVQ
LPNISKETLEKLNTCVLEDKYEDKEKPVSICPTKLGVTDWGVVDLIYNEMWKGGTRSGED
TAQVRNPAHQLEEAEEWNTPEQSNSEDSSLSDSDKTLVGDAPEDTTTTVPPQPHWHDRNY
KISKQFEIENWDIDDDSDYYFRATPYIDSRQQKLLKVLVDKRMRLSTLKKDLEPFVGVPV
EYFKIFRLSSSGESECSCLTETLNSYEDGERLNVKLGRALRNGEFKVKLYQLLIDSIEPY
NFLCEWIVSKDMTVGHAKKEILAEIKRKYDIDIPYEKCRLRKKCYKTPSKVFLNEQKFED
LRFHSQFEMIVQELPDKETATDTNQIVLFVRRWSPERMQLEQFQEIVLDSKTVEELKKKL
SSISDIPEEYIDIAKGKGSFPCENSVLRIQNDHDWSEQHESLSYNLDDGAVFLYRDNREK
QKPLHPDEVMEINIKEIKENSRLTPLSTTSSYSPRRERALKIYLDTE
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggtttgcagagacggcgaaaagattcaaacatgtgtagtacagtttaatatgcccttc
gaggcaaaccataaactttatagcgataaattaactttaaatgtatcgacacgtgtgaaa
gatctttaccattacatcgaagagcactaccacatgcgagcagacagcttcaagttgttg
ttatgcacgtcatcacgcagcctgatcgatttgtctgacgtgaaggagcaaaaaacgatg
gaagagattggagtggacttctcgggcgattctggcctgcccgagaacacgaagaacact
ttatatgtcgtcgatccgtcacaatccttcgccatagacgcgacgctaccaaagaccacg
gagtacggcgtacagggtttgccaacgtttaacttcgcgggtgccccggctctccagccg
cacgtgtgggacgaggaaaatatcgtcagggaagatgtgagagaagatgccagggacagt
agagaagaagttaacttcaggagttttatcaaaaccgagacgagttatgttggtttagtg
aaccaagcaatgacttgttacctgaacagcctcctccaagcattgtacatgacacctgag
ttccgtaacgcgctgtacaattgggagtacgtagatggttcggaaaaggatgaagcttta
agtataccatatcagttgcagaagctatttctcaatttgcagacgtctacaaaatccgca
gtggagaccacgtcgttaactaaaagtttcggatgggattccacggaagcgtggcagcag
catgacatccaagagctttgcagagtcatgttcgacgcgctggaacagaaattcaagaac
accgaacaggctgatctgatcaacaggctttacgaaggcaagatgatcgattacgtcaaa
tgcctcgagtgcggaacggagaaatcgagggaagatactttcctcgatatcccattgccg
gtcaaaccgtacggaagcaacgtcgcgtacaacagcgtggaggaagcgatcagagcgttc
gtccagtatgagacgctggagggaaccaatcagtaccactgcgaaaagtgcaccaagaag
tgcgacgcgcacaaagggttgaagttcacgaaattcccgtacctgttaactctacatctc
aagcggttcgacttcgattacaaaacctatcatagaatcaagcttaatgataaagtaacg
ttcccggacacgttgaacctcaactccttcatctcgtcgacgacgagtcaggagtcgccg
ggcggcgacgaggacgtcggtctgggtatcaagtgcgacgacagctcgacgacggacagc
ggtaccctggacgacgactgcgcaccgtgcgacaacagtctgtccaacagcaatcactcg
accagtcacgatcaggacgacgacgaaggtatcgatatgagcaacgggccgtcgacgtcg
agctgtaccacgcacaatcacgagaacgagaagaatcgcagtgcctgcatgctggcgaag
ggcccgtacatatacgagctgttctcgatcatgatccacagcgggagcgcgagcggcggt
cactattacgcttacataaaagatttcaggacgcaagagtggttgtgcttcaatgaccaa
agcgtgacccagataactcacgacgacatccagaagacgtacggcggcgggcccccgaga
acgtattacagcggcgtatacagcagtagcacgaacgcgtacatgctcatgtacaggcaa
atcgaccgcgcccgtaacgcactgccgatgcaaacgcaggacttcccgacgcacattcaa
gaattgctgaggaaaatgaaggagaacgaggataacgataggaaaaatcgggagaaacaa
atgtccatacccagattgaaggtctactgtcaccatccggtggagggaaagctgatgaac
atcaagctgtacgtcagcccggatatcacctgggccgaggcgacggagcaggcgtacaag
aaattcatgctcgagaacgtgagtctggatcagtgtcgtctggtcagctacgatcacaat
accgacatgatcgagtgcagctacgacgatcgcgagcacgagcctgtgcgcaagatatgg
cgtacctcgcgtcgtttcgacctattgctggagatacgtcgcaaggatcagaaattcgag
acatacttggcgggtggagtcgcgactagggtattcgtcatagacatagccagggaggag
gtaattgacggttcgatcgatatccggggttcgttgtcgcaaagtgttaaagactataaa
caaaccgtaggcaagattattaatatggatccgaaacaaatgaaagtaatagtgcaaaag
tatccggagactaggccggtggagaacgacgatagcgatctccagactgaaggattttat
aacgcgaataagatattcattacgacaatgtacgatatagataataacaaagcttttcaa
gaatcaacggtatacagagtcatagagaactttagacacgtcattactctgcacgttcag
ctgccaaatatcagtaaagaaacgttggagaaattgaatacctgcgtattggaagataag
tacgaggacaaggagaagccggtcagcatttgcccaactaagctgggcgttaccgattgg
ggcgttgtcgatctgatatacaatgaaatgtggaagggtggcacgcgaagtggcgaggat
accgcccaggtacgaaacccggctcatcaactggaggaggccgaagaatggaacactccc
gagcaaagtaacagcgaggacagcagccttagcgatagcgataagacgttggtcggcgac
gcgccggaggacaccaccaccaccgttccaccacagccgcattggcacgatcgcaattac
aagatctcgaagcagttcgagatcgaaaactgggacatcgatgatgattctgattactat
tttcgagctacgccgtatatagatagcagacaacaaaaattactcaaagtattagtagat
aaacgaatgagattaagcaccttaaagaaagatctggagccattcgtgggcgtaccagtg
gagtacttcaaaattttccgtctatcgagttccggggagtcggagtgcagctgcctgacg
gagacgctcaactcgtacgaggatggcgaaagactcaacgtgaaactcgggcgagccctg
cgcaacggggagttcaaagtgaagctgtatcagctgttaatcgactccattgagccttac
aactttttgtgtgaatggatcgtttcgaaagatatgacggtcggacacgcgaagaaggag
atactggcagaaataaagaggaagtacgacatagacataccgtatgagaaatgtcggctt
aggaaaaaatgttacaagacaccctcgaaggtgttcctgaatgaacagaagttcgaggac
ctccgatttcactcgcaatttgaaatgatcgttcaagaactaccggataaggagacagcc
acggacaccaatcaaattgtcttgttcgtgagaaggtggtcgccagaaagaatgcaattg
gaacagtttcaggaaattgtcttggacagtaaaactgtcgaagaattgaaaaagaagctc
tcttcgatatcggatattccagaagagtatatcgatatagcgaaggggaaaggaagcttt
ccgtgtgaaaattctgtgctgcgaatccaaaatgaccacgattggagcgagcagcatgag
agtctgtcgtacaatcttgatgatggcgccgtcttcttgtacagggataatagggaaaag
caaaagccattacatcccgacgaggtaatggagatcaatattaaggaaatcaaggaaaac
tcacgcttaacgccgctttctaccacttcgagttacagtccacgtagagagagagcactc
aaaatatatttggacaccgaatga
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