Oryza brachyantha (malo sina): 102707163
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Entry
102707163 CDS
T02995
Name
(RefSeq) histone deacetylase 19-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03082
ATP-dependent chromatin remodeling
obr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102707163
03083 Polycomb repressive complex
102707163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
obr03036
]
102707163
Enzymes [BR:
obr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102707163
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
102707163
HDAC complexes
Sin3A-HDAC complex
102707163
BRAF-HDAC complex
102707163
REST complex
102707163
SHIP complex
102707163
MiDAC complex
102707163
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
102707163
Heterochromatin formation proteins
Other heterochromatin formation proteins
102707163
Chromatin remodeling factors
NuRD complex
102707163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
102707163
NCBI-ProteinID:
XP_040384718
LinkDB
All DBs
Position
11:3516359..3517739
Genome browser
AA seq
449 aa
AA seq
DB search
MDTGGNSLPSPSCADDKKRRVSYYYDPGIAHVKFSDDHVMVPARVAMAHSLVGAHGMLGD
MRRLRTRPATEAEIRRFHSSEYVGLLRELTPEGYADDGPLQKKARRHGVGDDCPAFDRLW
EYCRSYAGGSLAAARALVGGDSDIAINWSGGMHHACQDMASGFCYVNDIVLAVNELLGRF
QRVIYVDIDAHHGDGVEKAFAESNRVMTLSFHRYGIRNGQAFFPGTGAVGDGDSYRVNVP
LDYGVRDEGYHAMFKPIVTKAMEVFRPEAIVLQCGADSLSGDRLGGMELSVRGHGECVSF
LRGFNLPLLLLGGGGYTINHVASTWCYETAVALGKERELPDEIPRHGYEDFYLNQGYKLH
YKIPPAPAKKKCRNAAPGTMQQVLERLSGLELAPSVQFHERRSSSAAAAGDDLYYEHPPS
LEDEDSAQRLHRLIMDKSRARTLDGTPDP
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggacaccggcggcaactcgctgccgtcgccgtcgtgcgccgacgacaagaagcggcgg
gtcagctactactacgacccgggcatcgcccacgtcaagttcagcgacgaccatgtgatg
gtgcccgcccgcgtcgccatggcgcacagcctcgtcggcgcccacggcatgctcggcgac
atgcgccgcctccgcacgaggcccgccacggaggcggagatccgccgcttccactcgtcg
gagtacgtcggcctcctccgcgagctcaccccggagggctacgccgacgacggcccgctc
cagaagaaggccaggcgccacggcgtcggcgacgactgcccggcgttcgaccgcctctgg
gagtactgccgcagctacgcaggcgggtcgctcgccgcggcgcgcgcgctcgtcggcggc
gactcggacatcgccatcaactggtccggcggcatgcaccacgcgtgccaggacatggcc
agcggcttctgctacgttaacgacatcgtgctcgccgtcaacgagctcctcggccgcttc
cagcgcgtgatctacgtcgacatcgacgcgcaccacggcgacggcgtggagaaggccttc
gcggagtccaaccgggtcatgacgctgtcgttccatcgctacgggatccggaacggccaa
gcgttcttcccgggcaccggcgccgtcggcgacggcgacagctaccgcgtcaacgtgccg
ctggactacggcgtccgcgacgaaggctaccacgcgatgttcaagccgatcgtcaccaag
gccatggaggtgttccggccggaagccatcgtgctgcagtgcggcgccgactcgctgtcc
ggcgaccggctcggtggcatggagctgtcggtgcgtggccacggggagtgcgtcagcttc
ctccgggggttcaacctgccgctgctgctcctcggcggcggcggctataccatcaaccac
gtcgcctccacgtggtgctacgagacggcggtcgccctcggcaaggagagggagctcccc
gacgagataccccgtcacggctacgaggacttctacctgaaccaggggtacaagctccat
tacaagataccaccggcgccggcgaagaagaagtgcagaaacgcggcgccgggaacgatg
cagcaggtcctcgagcgcctctccggcctcgagctcgcgccgagcgtgcagttccacgag
cgacgcagcagcagcgccgccgccgccggcgacgacctctactacgagcatcctccgagc
ctggaagacgaggattccgcgcagaggctgcaccgcctcatcatggacaagtctagggca
cgcacattggacggcacccccgacccctag
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