KEGG   Oryza brachyantha (malo sina): 102707163
Entry
102707163         CDS       T02995                                 
Name
(RefSeq) histone deacetylase 19-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03082  ATP-dependent chromatin remodeling
obr03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102707163
   03083 Polycomb repressive complex
    102707163
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:obr03036]
    102707163
Enzymes [BR:obr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     102707163
Chromosome and associated proteins [BR:obr03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     102707163
   HDAC complexes
    Sin3A-HDAC complex
     102707163
    BRAF-HDAC complex
     102707163
    REST complex
     102707163
    SHIP complex
     102707163
    MiDAC complex
     102707163
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     102707163
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102707163
  Chromatin remodeling factors
   NuRD complex
    102707163
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 102707163
NCBI-ProteinID: XP_040384718
LinkDB
Position
11:3516359..3517739
AA seq 449 aa
MDTGGNSLPSPSCADDKKRRVSYYYDPGIAHVKFSDDHVMVPARVAMAHSLVGAHGMLGD
MRRLRTRPATEAEIRRFHSSEYVGLLRELTPEGYADDGPLQKKARRHGVGDDCPAFDRLW
EYCRSYAGGSLAAARALVGGDSDIAINWSGGMHHACQDMASGFCYVNDIVLAVNELLGRF
QRVIYVDIDAHHGDGVEKAFAESNRVMTLSFHRYGIRNGQAFFPGTGAVGDGDSYRVNVP
LDYGVRDEGYHAMFKPIVTKAMEVFRPEAIVLQCGADSLSGDRLGGMELSVRGHGECVSF
LRGFNLPLLLLGGGGYTINHVASTWCYETAVALGKERELPDEIPRHGYEDFYLNQGYKLH
YKIPPAPAKKKCRNAAPGTMQQVLERLSGLELAPSVQFHERRSSSAAAAGDDLYYEHPPS
LEDEDSAQRLHRLIMDKSRARTLDGTPDP
NT seq 1350 nt   +upstreamnt  +downstreamnt
atggacaccggcggcaactcgctgccgtcgccgtcgtgcgccgacgacaagaagcggcgg
gtcagctactactacgacccgggcatcgcccacgtcaagttcagcgacgaccatgtgatg
gtgcccgcccgcgtcgccatggcgcacagcctcgtcggcgcccacggcatgctcggcgac
atgcgccgcctccgcacgaggcccgccacggaggcggagatccgccgcttccactcgtcg
gagtacgtcggcctcctccgcgagctcaccccggagggctacgccgacgacggcccgctc
cagaagaaggccaggcgccacggcgtcggcgacgactgcccggcgttcgaccgcctctgg
gagtactgccgcagctacgcaggcgggtcgctcgccgcggcgcgcgcgctcgtcggcggc
gactcggacatcgccatcaactggtccggcggcatgcaccacgcgtgccaggacatggcc
agcggcttctgctacgttaacgacatcgtgctcgccgtcaacgagctcctcggccgcttc
cagcgcgtgatctacgtcgacatcgacgcgcaccacggcgacggcgtggagaaggccttc
gcggagtccaaccgggtcatgacgctgtcgttccatcgctacgggatccggaacggccaa
gcgttcttcccgggcaccggcgccgtcggcgacggcgacagctaccgcgtcaacgtgccg
ctggactacggcgtccgcgacgaaggctaccacgcgatgttcaagccgatcgtcaccaag
gccatggaggtgttccggccggaagccatcgtgctgcagtgcggcgccgactcgctgtcc
ggcgaccggctcggtggcatggagctgtcggtgcgtggccacggggagtgcgtcagcttc
ctccgggggttcaacctgccgctgctgctcctcggcggcggcggctataccatcaaccac
gtcgcctccacgtggtgctacgagacggcggtcgccctcggcaaggagagggagctcccc
gacgagataccccgtcacggctacgaggacttctacctgaaccaggggtacaagctccat
tacaagataccaccggcgccggcgaagaagaagtgcagaaacgcggcgccgggaacgatg
cagcaggtcctcgagcgcctctccggcctcgagctcgcgccgagcgtgcagttccacgag
cgacgcagcagcagcgccgccgccgccggcgacgacctctactacgagcatcctccgagc
ctggaagacgaggattccgcgcagaggctgcaccgcctcatcatggacaagtctagggca
cgcacattggacggcacccccgacccctag

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