Oryza brachyantha (malo sina): 102711928
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Entry
102711928 CDS
T02995
Name
(RefSeq) pollen-specific leucine-rich repeat extensin-like protein 1
Organism
obr
Oryza brachyantha (malo sina)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRRNT_2
Motif
Other DBs
NCBI-GeneID:
102711928
NCBI-ProteinID:
XP_040385056
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All DBs
Position
11:complement(16359460..16364504)
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AA seq
1566 aa
AA seq
DB search
MVMDLHHLAPGGRRLAAVLLLLAATACLSASNVAAVTTSEASFIAHRQLLAMKEAGAGVD
GDLPTDFEFDDRVGVAVGDFPNPRLRRAYIALQAWRRAFYSDPKGYTNNWVGNDVCSYNG
VVCVAALDDPKIMVVAGIDLNGADIAGYLPPELGLLTDLAFFHINTNRFCGIIPKSMSRL
TLLHEFDVSNNRFVGLFPFVVLEMASLKYLDIRFNDFEGELPPGLFDKDLDAIFVNSNRF
VGYIPGNLGNSTASVIVFANNQFVGCIPKSIGHMEKTLDEISFTNNKLDGCVPMEIGYLK
NTYVIDVSGNVLVGTLPTTLSNCSKLEQLDVSRNVFTGVVHEAICELPVLVNFSFAFNFF
NSESAPCMPSENANVTLDDRSNCLGSLRPAQKTTLQCAPVLARPVDCSKHVCSGYPTPGK
PAVPPEKPPLISVPVGPPVLPAKPPEMAPSEDVPSPSPLPSYPSPKKFSPSPPQAPTPSE
EPPKEPSEPTPSPPQAPPPSEESPNEPSEPTPSPMAPAPAPYSHLSPKTQKHSPPPPQEQ
PPVASSPPPTPVSSPPPAEKSPPTPTPKASPAAPPAPEGYTPSPGKSPPSEAPPTSPPSS
EKSPPPPAPESYTPSPGKSPPPSEKSSPPPTPGKSPTQEPPTSPPPSEKSSPPPAPEEYT
PTPKKSSPPQAPSTSPPPSEKSSPPPAPEEYTPTPGKSSPTPPPPLEKSSPPPAPEGHTP
SPEKSSPPQAPPTSPPPLEKSSPPPAPEGHTPSPEKSSPPQAPSTSPPPLEKSSPPPAPE
EYTPTPGKSSPPQTPPTSPPPSEKSSPPPAPEGHTPSLEKSSPPQAPSTSSPPLEKSSPP
STPEEYTPTPGKSSPPQAPPTSPPSSEKSSPPPAPEGHTPSPEKSSPPQAPSTSPPPLEK
SSPPPAPEEYTPTPGKSSPPQASPTSPPPSEKSSPPPAPEEYTPTPGKSSPPQAPSTSPP
PSEKSSPPPALEGHTPPGKSSPETPPTSPPPSEKATPPPAPEGHTPSPEKSSPPEAPSTS
PPPSEKATAPPAPVSSPPTLEKTSSPPSALVSPPPLPIKALSPPTHVSSPPSPVKPSSPP
PAPVSAPPSPVKSSSSPPASVSSPPSLEKSSSSPPAPVSSPPLPEKSYSPPSTPISLPPP
VKFSSPPPEPVSSSPPAKSPPQPTPVTSPSPPTHVSSPPSEAKSPPTPVSSPPPEEKSPP
SPTPVISAPPSDKSQPPPTPTLKSSPPSVDEYVPPSPMKSTPPPSTKTPPSPTPTSPTPP
SEKSQPPPTPEPKSSPPSEDEYMPPSPMKPTLPPAEKSESPPSPAESLPPPMKSPPPQTP
IISEPPPMKSSPPQKPIITEPPPKAPVISEPPPAKSSPPHVPINPPPTSEESSPPTLVSS
SPPEVKPLPPPTPVSLPPPIVKSSPPPAPISSPPPPVKSPPPPTPVSSPPPAPVSSPPPP
VKSPPPPAPISSPPPPVKSPPPPAPVSSPPPAPVSSPPPPEKSPPPPAPISSPPPPVKSP
PPPAPVSSPPPAATTPPIKHEPSPKSESSAPPTMESEAPPSFDTVILPPVMAHQYASPPP
PQFQGY
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atggtcatggacctccaccacctcgcccccggcgggcgccgcctcgccgcggtgcttctc
ctcctcgccgccaccgcctgcctctccgcctccaatgtcgccgcggttaccacctccgag
gcgtccttcatcgcccaccgccagctcctcgccatgaaggaggccggcgccggcgtcgac
ggcgacctccccaccgactttgagttcgacgaccgcgtcggcgtcgccgtcggcgacttc
cccaaccctcgcctccgccgcgcgtacatcgcgctgcaggcgtggcgccgggcgttctac
tccgaccccaaggggtacaccaacaattgggtcggcaacgacgtctgctcctacaacggc
gtcgtctgcgtcgccgcgctcgacgaccccaagatcatggtcgtcgccggcatcgacctc
aacggcgccgacatcgccgggtacctcccgccggagctagggctgctgaccgacctcgcc
ttcttccacatcaacaccaaccgcttctgcggcatcatccccaagagcatgtcgcggctg
acgctgctgcacgagttcgacgtcagcaacaaccgcttcgtcggcctcttccccttcgtc
gtgctcgagatggcgtcgctgaaatacctcgacatccggttcaacgacttcgagggcgag
cttccgccggggctgttcgacaaggacctcgacgccatcttcgtcaacagcaaccgcttc
gtcgggtacatcccggggaacctcggcaactccaccgcctccgtcatcgtgttcgccaac
aaccagttcgtcggctgcatccccaagagcatcggccacatggagaagacgctcgacgag
atcagcttcaccaacaacaagctcgacgggtgcgtgcccatggagatcggctacctgaag
aacacctacgtcatcgacgtcagcggcaacgtgctcgtcggcacgctgccgaccacgctc
tccaactgcagcaagctggagcagctcgacgtgtcgaggaacgtcttcaccggcgtcgtg
cacgaggccatctgcgagctccccgtgctcgtcaacttcagcttcgccttcaacttcttc
aactcggagtcggcgccgtgcatgccgtcggagaacgccaacgtcacgctcgacgaccgg
agcaactgcctcggctcgctgcgcccggcgcagaagacgacgctgcagtgcgcgcccgtg
ctggcgcgccccgtcgactgcagcaagcacgtctgctccggctacccgacgcccgggaag
ccggcggtgccgccggagaagccgccgctcatctcggtgccagtgggacctccggtgctc
ccggcaaagcccccggagatggcgccaagtgaggatgtgccgtcaccgtcgccactgcct
tcctatccatcacccaagaagttttcgccatcgccaccccaagcaccaactccatcagag
gagccaccgaaagaacccagcgaaccaacgccatcgccaccccaagcaccacctccatca
gaggagtcaccgaatgaacccagcgaaccaacgccatcgccaatggcgccagcacctgca
ccgtatagtcacctgtcgccaaaaacacagaagcattctccaccgccaccacaagagcag
cctcctgttgcctcctctccaccaccaactccggtgagctcaccgccaccagctgagaag
tctcctcctacacctacaccgaaggcctcgcctgcagcgccacctgctccagagggctac
acaccttcccctggaaagtctccgccatcagaggctcccccaacttctccaccttcttca
gagaagtctcctccgccaccggctccagagagctacacaccttctccaggaaagtctcca
ccaccatcagagaagtcttctccaccacctactccaggaaagtctccaacacaagaacct
cccacttccccacctccttcagagaagtcatctccaccgccggctccagaggaatacact
cctaccccgaaaaaatcttcaccaccacaggcaccatcgacatctccacctccatcagag
aagtcatctccaccgccggctccagaggaatacactcctaccccaggaaaatcttcaccg
actcctccacctcccttagagaagtcatctccaccaccggctccagagggccacacacct
tctccagaaaaatcttcaccaccacaggcaccaccgacttctccacctcccttagagaag
tcatctccaccaccggctccagagggccacacgccttctccagaaaaatcttcaccacca
caggcaccctcgacttccccacctcccttagagaagtcatctccaccaccggctccagag
gaatacactcctaccccaggaaaatcttcaccaccacagacaccaccgacttctccacct
ccctcagagaagtcatctccaccaccggctccagagggccacacaccttctctagaaaaa
tcttcaccaccacaggcaccctcgacttcctcacctcccttagagaagtcatctccaccg
tcaactccagaggaatacactcctaccccaggaaaatcttcaccaccacaggcaccaccg
acttctccaccttcctcagagaagtcatctccaccgccggctccagagggccacacacct
tctccagaaaaatcttcaccaccacaggcaccctcgacttccccacctcccttagagaag
tcatctccaccgccggctccagaggaatacactcctaccccaggaaaatcttcaccaccg
caggcatcaccgacttctccacctccctcagagaagtcatctccaccgccggctccagag
gaatacactcctaccccgggaaaatcttcaccaccacaagcaccctcgacttctccacct
ccctcagagaagtcatctccaccgccggctctagagggccacacacctcccggaaaatct
tccccagagacgcccccgacttccccacctccatcggagaaggcaactccaccaccggct
ccagagggccacacgccttccccagaaaaatcatcaccaccagaggcaccctcaacttcc
ccacctccctcggagaaggcaactgcaccaccggctccagtgagctctccaccaacccta
gaaaaaacttcatcaccaccgtcagctctagttagcccaccgccattaccgatcaaagct
ctgtcaccaccaactcatgtgagctctccaccatccccagtgaaaccttcctcaccacca
ccagctccagtaagtgcaccaccatctccggtgaaatcttcatcgtcaccaccggcttcg
gttagctcaccaccatccttagaaaaatcttcttcatctccaccagctccagttagctct
ccgccactaccagagaaatcctactcaccaccatcaactcctattagcttaccaccacca
gtgaaattttcctcaccaccaccagaaccagttagttcatcaccacctgcaaagtctcca
ccacaaccaactccagtcacctcaccatcaccaccaactcatgtaagctcaccaccatca
gaggcaaagtctccaccaacaccagtgagctctccccctcctgaagagaagtccccacca
tcgcctactccagtgatctcagcgccaccctcagacaagtcacaaccgccacccacacca
acactaaagagctctccaccatctgttgatgaatatgttcctccatctccaatgaaatca
actccaccaccctcaacaaagaccccaccatcacctacgccaacgagcccaaccccacca
tcagaaaagtcacaaccaccacccacaccagaaccaaagagttctccaccatctgaagat
gagtatatgccaccatctccaatgaaaccaactctacctccagctgagaagtccgagtca
ccgccttctccggctgagtctctacccccaccaatgaagtcgccaccaccacaaacacca
attatctcggaaccgccaccaatgaagtcttcaccaccacaaaaaccaattatcacagaa
ccaccaccaaaagcaccagtgatctcagaaccaccgccagctaagtcttcacctccacac
gtaccaattaacccaccaccaacatcggaggagtcttccccaccaacactagtaagctca
tcaccaccagaagtgaaacctctacctcctccgactccagtgagcttacctcctcctata
gttaagtcttcaccgccaccagctcctattagctcaccaccacctccggttaaatcgccg
ccaccaccgactccagtgagctcacccccaccagctccggtgagctcacctcctcctccg
gttaaatcacctcccccgccggctccaataagctcaccacctcctccggttaagtctcca
ccgccaccagcaccggttagctcaccaccaccagcgccggttagctcaccgcctcctcca
gagaagtcaccacctccaccggcaccaattagctcaccgcctcctccagtgaagtctcca
cctccacctgccccagtcagctcaccacctccggcagccaccactcccccaataaaacat
gagccgtcaccaaaatcagaatcatcggctccaccaaccatggaatctgaagctccacca
tcatttgacaccgtgatcttaccgccggtgatggcgcaccaatacgcctcaccaccaccc
cctcaattccaagggtactaa
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