Oryza brachyantha (malo sina): 102717797
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Entry
102717797 CDS
T02995
Name
(RefSeq) U-box domain-containing protein 6-like
Organism
obr
Oryza brachyantha (malo sina)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
U-box
zf-RING_UBOX
ARMC9_ARM
zf-C3HC4_4
zf-Nse
Glyco_transf_90
DUF5798
Motif
Other DBs
NCBI-GeneID:
102717797
NCBI-ProteinID:
XP_015692260
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All DBs
Position
4:13214206..13230167
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AA seq
1141 aa
AA seq
DB search
MDKVEVDGNFIASGNWKLHGALCKQLHKIVLEVLDAIPVLEATRPRNSSGLLALSSLRIA
VEKAKNLLQYCSECSKFYLALTTENVITKFEKARYALLESLHQLEETLPEATSSQIQGIA
TDLEKTVFCLDHIQRQVGADVNQLVQNEAKSNGFLDDNELEFFRQTAFRIGIASSAAALT
ERRALRRLLERAHAAEDMKKESIASYLLHLMRKYSNLFRSETTDFTNSSLCSSPSCSSSS
LSSSIDLPGNVHAIEKPMSRVGSFNLRQIKGLSGSMPLPPEELRCPISLQLMYDPVIVAS
GQTYERACIDKWFSSGNTTCPKTRNELSQLSMTPNYCIKGLIASWCEQNGVLVPSAPPDS
PKLKYLRISSLTSSKCLVTNGVSTILFEDAKDEAKVGSKVASEKCTRQNSGEAPSEICEV
EISPEKRPRGNSGKVARATCDLWVRALSKDYEGCVDEQREVIEQIRFLLKDDGELRNCAG
ASGITELLIQFLDKALCRDDFQCQVVGTMALFNLAVSNDRNKKQLLSGGVIPMMEQMIQM
PETYEAAVAMYLNLSCLPEAQVIIGQSKATPVLINGLREDGYRSRTCCLDALLTLYNVSL
QPSNIPTLIAAGVIESLHGVLAPSSPMTEKALAVLINLALTRAGKKEIAANSDMVGAIVV
ILDNGEPAEKEKAVSCLWIICSGDEGGSLMVLQEGVIPALTESESEAGRLIDDLDLQGKL
QYPNSQHKRYIVKDGAPTLIPSDPIGLMKSTVLSTKSKLKLFLEPFLYEKSSKRNSGKVS
DEHLSESVASFFERHFGKEVVDYLIDPFVAGTSGGDPESLSIRHAFPALWNLENKYGSVI
AGAILSKLSTKGESVKTGGATPGKGRNKRVSFSFHGGMQSLIDALHNEVGDGNVKLGTEV
LSLACSCDEISSSGGWSIAVDSRDAKGKDLRKNQSFDAVIMTAPLSNVQRMKFTKNGAPF
VLDFLPKVDYLPLSLMVTAFKKEDVKRPLEGFGVLIPYKEQQKHGLKTLGTLFSSMMFPN
RAPNDQYLYTSFIGGSHNRDLAGASTAILKQLVTSDLRKLLGIEGQPTFVKHVHWGNAFP
LYGRNYDLVLEAIAKMEKNLPGFFYAGNNKDGLAVGNVIASGSKAAELVLSYLESHTDQD
N
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggataaagtcgaggtcgatgggaacttcattgcttctggtaattggaagctgcatgga
gcactatgtaagcaacttcacaaaatagttcttgaagttttggatgctattccggtcctt
gaggctacaaggcctagaaacagttccggacttcttgcattgagttccttgcgtatagct
gttgagaaggccaagaatctacttcagtattgctcagaatgtagcaagttttacttggcc
cttacaacagaaaatgtcatcacaaaatttgagaaagcaagatatgcacttctggagagt
cttcaccaactggaagaaacacttccagaggcaaccagttctcagatacaaggtatcgca
actgatctggagaaaacagttttttgtttggatcatattcaaagacaagttggtgcggac
gtgaatcaactagttcagaatgaagcaaaatccaatgggttccttgatgacaatgaactt
gaatttttccggcaaactgcttttcggattggcattgcatcatcagcagcagctcttact
gagagaagagcgcttagaaggctacttgagagggctcatgcagcggaggatatgaagaaa
gaatcaattgcatcttacctactgcacctcatgaggaaatactcaaacctttttaggagt
gaaacgacggattttaccaactcctctctgtgctcaagcccttcttgctcttccagttca
ctgtccagctcgatcgatctccctggaaatgtccatgctatcgagaagccgatgtccagg
gttggctcctttaatctcaggcagatcaaaggcttgtcaggcagcatgccattgccaccc
gaggaactcaggtgcccgatctccttgcagctcatgtatgaccctgtcattgttgcatct
ggtcagacatacgagcgggcctgcattgacaaatggtttagcagcggcaacacaacctgc
ccaaagactcgcaacgaactgtcccagctctccatgacgcccaactactgcatcaagggt
ttaatagcgtcctggtgcgagcagaacggggttctagttccatcagcgccacctgattct
cccaagctcaagtacctgcggatatcatccctgacaagtagcaaatgcctcgtgaccaac
ggtgtcagcacgatcttgttcgaggatgcaaaggacgaggccaaggtaggcagcaaggtt
gcttcggagaagtgcactcgccagaactccggtgaggctccatcagagatatgtgaagtc
gagatctcgccggagaagcgccctcgtgggaactccgggaaggttgcacgggcgacatgt
gatctctgggttcgcgcgctgagcaaggactacgaggggtgtgtcgacgagcaacgtgag
gtgatcgagcagatcaggttcttgctcaaggatgacggcgagctcaggaactgtgcgggt
gctagtggcattaccgagctactcattcaatttctggataaggctctctgcagagacgat
tttcagtgtcaggtggttggaacaatggctcttttcaaccttgcggtcagcaatgacagg
aacaagaaacagctgctctcaggtggggttatccccatgatggagcagatgatacagatg
cctgaaacctacgaggctgccgtcgcgatgtacctgaacctctcctgcctccccgaggcg
caggtgatcatcggccagagcaaggccacgcctgtcctcatcaacggcctgcgagaagac
ggctaccggagcaggacctgctgcctcgacgccctcctgacgctgtacaacgtgtcgctg
cagccgtcgaacatcccgaccctcatcgccgccggcgtcatcgagagcctccacggcgtc
ctggcgccgtcctccccgatgacggagaaggccctggccgtgctgatcaacctggcgctg
acccgcgccggcaagaaggagatcgcggccaactcggacatggtgggcgccatcgtcgtc
atcctcgacaacggggagcccgccgagaaggagaaggccgtgtcctgcctgtggatcatc
tgcagcggcgacgagggcggcagcctgatggtgctccaggaaggcgtgatcccggcgctg
acagaaagtgaatctgaggcaggcaggcttattgacgatcttgacctacaaggcaaacta
cagtatcctaactcccaacacaagcgttacatcgtcaaagatggagcaccgacactgatt
ccctcagaccccattgggctcatgaaaagcactgttctttctacaaaatcaaagcttaag
ttgtttctggagccatttctctacgagaaatctagcaaaagaaactctggaaaagtgtct
gatgagcatttaagtgagagtgttgcaagcttctttgaacgtcactttggaaaagaggtt
gtagactatcttatcgatccatttgtggctggaacaagtggaggagatcccgagtcacta
tcaattcgtcatgcatttccagcattatggaatttggagaataagtatggctctgtcatt
gctggtgccatcttgtccaaactatccactaagggcgagtcagtgaagacaggaggtgca
acgcctgggaaaggaaggaataaacgagtgtcattttcatttcatgggggaatgcagtca
ctaatagatgcacttcacaatgaagttggagatggtaacgtgaagcttggtacggaagtg
ttgtcattagcatgtagctgtgatgaaatttcttcatctggtggttggtcaattgcggtg
gattcaagagatgctaaagggaaagatctcagaaagaaccaatcctttgatgctgttata
atgactgctccattgtctaatgtccagaggatgaagtttacaaaaaatggagctcccttt
gtacttgactttcttcctaaggtggattatcttccactatctctcatggtaacagctttt
aagaaggaagatgtcaaaagaccattggaaggatttggcgtcttgattccctacaaggaa
cagcaaaagcatggtctgaaaacccttggaactcttttctcctcgatgatgtttccaaat
cgagctcctaatgatcaatatctatatacatcgttcatcgggggaagccataatagagac
cttgctggagcttcaacggctattctgaaacagcttgtgacctctgacctaagaaagctc
ttgggtattgagggacaacctacttttgtaaagcatgtacattggggaaatgcttttcct
ttatatggccgcaattatgatttggtattggaagctatagcaaaaatggagaaaaatctt
ccagggttcttctatgcaggaaataacaaggatgggttggctgttggaaatgttatagct
tcaggaagtaaggctgctgagcttgtattgtcgtatcttgaatctcacacagatcaagac
aattaa
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