Afipia carboxidovorans OM5 (Mississippi): OCAR_4550
Help
Entry
OCAR_4550 CDS
T00783
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca00521
Streptomycin biosynthesis
oca00523
Polyketide sugar unit biosynthesis
oca00541
O-Antigen nucleotide sugar biosynthesis
oca01100
Metabolic pathways
oca01110
Biosynthesis of secondary metabolites
oca01250
Biosynthesis of nucleotide sugars
Module
oca_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
OCAR_4550 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
OCAR_4550 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
OCAR_4550 (rfbC)
Enzymes [BR:
oca01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
OCAR_4550 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Peptidase_M1
Motif
Other DBs
NCBI-ProteinID:
ACI91695
LinkDB
All DBs
Position
complement(540012..540557)
Genome browser
AA seq
181 aa
AA seq
DB search
MTAAAATLDGVVVIEPQVFTDARGYFFESFNAERFRERVARDVTFVQDNQSLSRKGVVRG
LHYQIAPKAQGKLVRALAGEIFDVAVDIRKGSKQFGQWFGTILSAENKKQLWVPEGYAHG
FQVLSETAEVLYKTTDFWSAAHERAIRWDDPTLAIDWPLKEGCIVSGKDGEAPLLADATL
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgcagcggcaacactcgatggcgtcgtggtgatcgagccgcaggtattcacc
gacgcgcgtggttattttttcgagagcttcaacgccgagcgcttccgtgaacgcgtagcc
agagacgtgaccttcgtgcaggacaatcagtccctgtcgcgcaagggcgtggtgcgcggc
ctgcactatcagatcgcgccgaaggctcaaggcaagctggtgcgggcgctggcaggcgag
attttcgacgtcgccgtcgatatccggaaaggctcgaagcaattcggccaatggttcggc
accatcctcagcgcggaaaacaagaagcagctctgggtgccggaaggatatgcccacggc
tttcaggtgctgagcgagaccgccgaggtgctctacaagaccaccgacttctggtcggcc
gcgcatgagcgcgccatccgctgggacgacccgacgcttgcgatcgactggccgctcaag
gagggttgcatcgtgtcggggaaagacggcgaagcgccgcttcttgctgacgcgacgctg
ttctga
DBGET
integrated database retrieval system
