Oceanicola sp. D3: FHY55_16625
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Entry
FHY55_16625 CDS
T06139
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ocd
Oceanicola sp. D3
Pathway
ocd01501
beta-Lactam resistance
ocd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FHY55_16625
01503 Cationic antimicrobial peptide (CAMP) resistance
FHY55_16625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocd02000
]
FHY55_16625
01504 Antimicrobial resistance genes [BR:
ocd01504
]
FHY55_16625
Transporters [BR:
ocd02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
FHY55_16625
Antimicrobial resistance genes [BR:
ocd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FHY55_16625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
QDC10754
UniProt:
A0A5B8BXM5
LinkDB
All DBs
Position
complement(3339061..3342171)
Genome browser
AA seq
1036 aa
AA seq
DB search
MAQFFIHRPIFAWVLAIVTMLAGVFAFTQLPVSQYPDIAPTTIRVSASYPGATASAVENS
VTSVIEDSMTGLDGVLYMESTSREGSSSISLTFDESIDPVDAQNNVQSKVSQVEGRLPDA
VQSSGVSVSRSTSSILMVGAIVSADGRYSTIELGDILDNQISGPVQRTEGVGGINIFGSG
YALRVWLDPLSLYEYQLTPADVTSAIQAQNNTVSVGSLGDMPVVTGQQFTATITAQSQLT
SVEDFENILLKSEEGGAQVLLGNVAKIEIGQESYGGDSRFDGANAAGFGINLATGANAVD
TAEAVRATLDELAASLPEGLTVEYAYDTSPFVELSIEKVYHTLIEAVVLVFFVILIFLQN
WRATLIPIIAVPVVLAGTFAVLAALGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVME
DDGLEPLPATEKGMGQITGAVVGIALVLSAVFLPMAFFGGSTGVIYRQFSVTIISAMVLS
ALVALILTPALTASMLRRSGHEVPFAPARAFNRGFARLTSGYAGSVGRIARKPLIAVGLI
AALVLGAAATYSRLPSSFLPTEDQGVLMAMINLTEGTTSAQTAQVVDEIEAYLQAEESEA
VESTFATLGFGFSGSGQNAAMVFIKLRDFEERTDDSLSAASVAARATAQFGNLRAGRVMF
MQPPAIPGLGNTSGFSMYLVDYANNGTEALRAAASQLETAAEADPRFASTRASGIESEAV
LRIDIDQQKAESFGVSVTSVNAILSTIFAGSNVNDFDMNGSLRPVIVQAAAEYRMQPEDI
EAWYAINSSGEMVSFAAFMETRWISSTPSLARIDGVNAISVSGSPAQGVSSGDAMEAITE
LAGELDGGYGVAWTGLSFQEQQSGSQAPYLYALSALVVFLSLAALYESWSIPFAVMLSVP
VGVAGAFAFALLFGQSNDVYFKVGILTTIGLAAKNAILIVEFARDLEAQGRSAIEAAIEA
ARMRLRPILMTSFAFMMGVLPLALATGAGAQAQNAIGIAVLGGMAAATFIGIFIVPACFV
LVRKLSRKPVAGTAQD
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtttttcatccaccgccccatctttgcttgggtcttggccatcgtgacgatg
ctggccggggtctttgcctttacccaactgccggtctcgcaatatcccgacattgcccca
accacgatccgggtgagcgccagctacccgggggccacggcctcggcggtggaaaactcg
gtgacatcggtgatcgaggattccatgaccgggctcgacggcgtgctttacatggaaagc
acatcgcgcgagggctcctcttcgatttcgctgaccttcgatgaaagcatcgacccggtg
gatgcgcagaacaacgtgcaatccaaggtcagccaggttgaagggcggttgcccgatgcg
gtgcaatcctcgggcgtgagcgtttcgcgctccacctcctcgatcctgatggtcggggcc
atcgtctcggctgatgggcggtattcgaccatcgagttgggcgatattctcgacaatcag
atctccggcccggtgcagcgcaccgagggcgtgggcgggatcaacatttttggctcgggc
tatgcgctgcgggtctggctcgatccgctttcgctttatgaataccagctcacgcccgcc
gatgtgacctctgccattcaagcgcaaaacaacacggtttcggtgggctcgctgggcgat
atgccggtggtcaccggacagcagtttaccgcaaccatcaccgcgcagagccagctgacc
agcgtggaggatttcgagaacattctgctgaaatccgaagagggcggtgcacaggtgttg
cttggcaacgtggcgaagatcgagatcgggcaagagagctacggcggcgactcccggttt
gacggggcgaatgcggcgggcttcgggatcaaccttgccaccggggccaacgcggtggac
accgcagaagcggtgcgcgccacgctggatgagctggccgcctcgctgcccgaggggctg
acggtggaatacgcctatgacacctcgcccttcgtcgagctgtcgatcgagaaggtctat
cacacgctgatcgaggcggtggtgctggtgttctttgtcatcctgatcttcctgcaaaac
tggcgggcaacgctcattccgatcatcgcggtgccggtggtgctggcgggcaccttcgcg
gtgctggcggcgctgggctattcgatcaacacgctgacgatgtttgcgatggtgctggca
atcggcctgctggtggatgatgcgattgtggtggtcgaaaacgtcgagcgggtgatggag
gatgacgggctggagcccttgcccgccaccgagaagggcatgggccagatcaccggcgcc
gttgtcggcattgcgcttgtgctctcggcggtgttcctgccgatggcctttttcggtggc
tcgaccggggtaatctaccggcagttctcggtcaccatcatctcggccatggtgctttcg
gcgctggtggcgctcattctcaccccggcgctcacggcttcgatgctgcgccgcagtggc
catgaggtgccctttgctccggcgcgggccttcaacaggggctttgcgcggctgacctcg
ggctacgccggatcggttgggcggattgcgcgcaagccgctgatcgccgtggggctgatt
gccgcgctcgtgctcggtgcagcggccacctactcgcggttgccgtcctccttccttccg
acggaggaccaaggcgtgctgatggcgatgatcaacctcaccgagggcaccacctcggcg
cagacggcgcaggtggtggatgagatcgaggcctatttgcaggccgaagaatccgaggcg
gtggagagcacctttgccacgctcggctttggcttttccggctcggggcagaatgcggcg
atggtgttcatcaagctgcgcgactttgaagagcgcacggatgacagcctgtcggcggct
tccgtggccgcccgggcaacggcgcagtttggcaacctgcgggccgggcgggtgatgttc
atgcagcccccggcgattccgggccttggcaacacctccgggttttcgatgtatctcgtg
gattacgccaacaatggcaccgaggccctgcgtgccgccgcctcgcagctggaaaccgcc
gccgaggccgatccgcgctttgccagcacccgcgccagcgggatcgagagcgaggcggtg
ctgcgcatcgacatcgaccagcagaaggccgagagctttggcgtcagcgtgaccagcgtc
aacgccatcctctcgaccatcttcgccgggtccaacgtgaatgacttcgacatgaacggc
tcgctgcgcccggtgatcgtgcaggccgccgccgaataccggatgcagccggaagacatc
gaagcctggtatgcgatcaacagcagcggcgagatggtcagctttgccgccttcatggaa
acccgctggatctcctccacgccctcactggcgcggatcgacggggtcaatgcgatttcg
gtgtcgggcagcccggcgcagggcgtgtcgtcgggcgatgcgatggaggcgatcaccgag
ttggccggtgagctggacggcggctatggcgtggcttggaccgggctatcgtttcaggag
cagcaatcaggcagtcaggccccctatctttatgcgctttcggcgctggtcgtgttcctg
tcgctcgcggcgctttatgagagctggtcgatccccttcgcggtgatgctttcggtgccg
gtgggcgtggcgggggccttcgccttcgcgctgctcttcgggcaatccaacgatgtgtat
ttcaaggtcgggatcctgacgaccatcgggcttgcggcaaagaatgccatcctgatcgtc
gagttcgcccgggatctggaggcgcagggccgctctgccatcgaggcggcgatcgaggcg
gcaaggatgcggctgcggccgatcctgatgacctccttcgccttcatgatgggggtgttg
ccgctggcgctcgccaccggcgcgggggcacaggcgcaaaacgccattggcatcgcggtg
ctgggtggcatggcggcggccaccttcatcggcatcttcatcgttccggcctgttttgtg
ctggtgcgcaagctctcgcgcaagccggtcgccgggacggcgcaggactga
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