Ochrobactrum quorumnocens: CES85_1786
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Entry
CES85_1786 CDS
T05040
Name
(GenBank) poly A polymerase head domain protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
och
Ochrobactrum quorumnocens
Pathway
och03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
och00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CES85_1786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
och03019
]
CES85_1786
Enzymes [BR:
och01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CES85_1786
Messenger RNA biogenesis [BR:
och03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CES85_1786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
ASV87408
UniProt:
A0A248UL62
LinkDB
All DBs
Position
1:complement(1673173..1674456)
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AA seq
427 aa
AA seq
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MSETLIHSINISSRADWLKAKPLQALFAALNRDGGEARVVGGAVRNTLLGTKVSDIDLAT
THLPQDTVRLAQEAGFKPVPTGIEHGTVTVVVQGQPFEVTTLRKDIETDGRHAKVAFGTD
WKTDAERRDFTINALYATVDGEVIDFVGGLADIETRTLRFIGDAEARIREDYLRILRFFR
FFAWYGSGRPETDGLRASARLKDGLDQLSAERVWSELKKLLAAPDPSRALLWMRQAGVLT
AILPESEKWGIDSIHGLVRTEGDLGWPIDALLRLESIIPPDTARVNAMGKRLKMSNAERA
RLEAWARTEIIKPEMSEQALKKLVYRGSKQAVLDRIQLSYAQARNEAIGSDEAMIRAGGF
ARLLDAVQSYEAPVFPVTGGDLLRLGFEKGPVLGEKLRELETLWIDSGFSLDHEALLDKL
DRNKMND
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgagacactcattcattccatcaatatttctagccgtgccgactggctgaaggcg
aagccacttcaggcgctttttgcagcattgaaccgtgatggtggcgaggcgcgcgtggtc
ggcggagctgtgcgcaacacgctgctgggtacaaaagtcagtgatatcgacttggccacc
acgcatctgccgcaggatactgtacgacttgctcaggaagcaggcttcaagcccgtacca
actggtattgagcatggcacggtgacggttgtcgttcagggacagccgtttgaagtgaca
acactgcgtaaggatatcgaaaccgatggtcgccatgcaaaagtggctttcggtaccgac
tggaagacggacgccgagcgacgtgattttacgatcaacgcgctttatgcaacggttgat
ggcgaggtcatcgattttgtcggtgggctggctgatatcgaaacgcggacgctgcgtttc
attggtgatgctgaagcgcgcatccgggaagattacttacgtatcctgcgctttttccgt
ttctttgcatggtatggttcgggtcgtcccgaaaccgatggtctgcgcgccagtgcgcgt
ctcaaggatggccttgatcagctttctgccgagcgggtctggtctgaacttaaaaagctc
cttgctgctcccgatccttcgcgggcgcttttgtggatgcggcaggctggtgtcctcacc
gccattctgcctgaaagtgaaaaatggggcatcgattcaatccatggcctggtgcgcacg
gaaggcgatcttggctggcctatagatgccttgttacggcttgaaagtataatcccgccc
gatacggcacgcgtcaatgctatgggcaaacgactgaaaatgtcgaacgcagaacgggcg
cggctcgaagcatgggcacgcactgaaattatcaagccggaaatgtctgaacaggcgctg
aaaaagctcgtttatcgtggcagcaagcaggcggtcctggatcgcattcagctcagctat
gctcaagcacgcaatgaagcgatcggcagtgatgaggccatgatccgtgcgggcggtttt
gcccgcctgcttgacgctgttcaaagctatgaagcgccggtgttcccggttacgggtggc
gatcttcttcgccttggcttcgagaaaggccccgttttgggcgaaaagctgcgcgagttg
gaaactctctggattgactcaggttttagtcttgaccatgaagcgcttctggacaaactt
gatcgcaataaaatgaacgattga
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