Oceanispirochaeta crateris: EXM22_02915
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Entry
EXM22_02915 CDS
T06177
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ock
Oceanispirochaeta crateris
Pathway
ock00521
Streptomycin biosynthesis
ock00523
Polyketide sugar unit biosynthesis
ock00541
O-Antigen nucleotide sugar biosynthesis
ock01100
Metabolic pathways
ock01110
Biosynthesis of secondary metabolites
ock01250
Biosynthesis of nucleotide sugars
Module
ock_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ock00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
EXM22_02915 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EXM22_02915 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EXM22_02915 (rfbC)
Enzymes [BR:
ock01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EXM22_02915 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
PepX_C
Motif
Other DBs
NCBI-ProteinID:
QEN06985
UniProt:
A0A5C1QFZ1
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All DBs
Position
635076..635627
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AA seq
183 aa
AA seq
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MPFEFTKTALRGVVIIQPRKFGDERGFFMETYKKSDFMAHGILEEFCQDNHSFSSKGVLR
GLHFQSAPHAQGKLVRVLSGAVWDVAVDLVPGSSTYGKHVGIELTAENNTMFYIPPGFGH
GFLTLSDDTHFLYKCTAEYAPASDGGVKWDDPELAVKWPLEVGQIPLVSDKDAVLPYLKD
LNK
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgccttttgagtttacaaagacggcacttcgtggagttgtcatcattcagccccgaaag
ttcggagatgaacggggcttctttatggaaacttataagaagagtgattttatggctcat
ggtattcttgaggagttttgtcaggacaaccactctttttcatccaaaggggttctgagg
ggcctccactttcaaagtgctcctcatgcccagggaaagctggtgcgtgtgttgtctggg
gcagtttgggatgtggctgttgatcttgttccaggatcatctacctatggaaaacatgtc
gggattgaacttacagcagaaaataatacaatgttttacattccccccgggttcggtcat
gggtttttaactctttctgatgatacacattttctatataaatgtaccgctgaatatgcc
cctgcatccgatggtggtgtcaaatgggacgatccagagctggctgtcaaatggcctctg
gaagtagggcagattcccctggtatcggataaggacgccgtcctgccgtatttgaaggat
ctgaataaatga
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