Ochrobactrum sp. EEELCW01: GTN27_01180
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Entry
GTN27_01180 CDS
T07148
Name
(GenBank) substrate-binding domain-containing protein
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
ocl
Ochrobactrum sp. EEELCW01
Brite
KEGG Orthology (KO) [BR:
ocl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocl03000
]
GTN27_01180
Transcription factors [BR:
ocl03000
]
Prokaryotic type
Helix-turn-helix
LacI family
GTN27_01180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
HTH_3
Peripla_BP_4
SBDS_domain_II
HTH_26
TetR_N
Motif
Other DBs
NCBI-ProteinID:
QTN01870
LinkDB
All DBs
Position
1:266671..267702
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AA seq
343 aa
AA seq
DB search
MTEQKIRTMEEFAAASGLSRPTVSKYFDNPESVKPSTRARIEKALKDYNYQPNIFAVSLN
RKKPKNIGVIVPHISDPFYAEIIRQIEMRCLAEGYWTIVLSSHGERKLEARAMRTLMSLK
IAGVLMAPLGFDTDEKLLSSLSNSTPAVFLDSRISDDQPFVGTDNRQSIGNITEYLYRTG
EHPCFLEMPAVNQNALERRSAYIETMERLGVEPIVLPIEAKNWNFEELGYQEAGRIFDRG
GFPTRTVLCANDRLAFGVISAAFERRRHVGREEGCDLRVAGHDDHPLSRFTCPPLTTVAQ
DYRQIAQLGLDMLFSRINAQESGVAVEKEIRRLDSHLIMRGSA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacagaagatcaggacgatggaagagttcgcggcggcaagcggattgtctcgt
cctacggtctcgaaatatttcgacaatcctgaaagcgtaaagccttccacgcgggctcgt
atcgaaaaggcgttgaaagactataattatcagcccaacatttttgcagtcagcctcaat
cgcaagaagccgaagaacatcggcgttatcgttccgcatatatccgatccattctacgcg
gaaatcattcgccagatcgagatgcgctgtctggcggagggctactggaccatcgtgctg
tcatctcatggtgagagaaaactcgaagcgcgggcgatgcgcaccttgatgtctctcaag
attgcgggtgttctgatggctccgctcggtttcgatacggatgagaagcttctttccagt
ctgtcgaactcgacacctgcagttttcctggacagccgtatcagcgacgatcagccgttc
gtcggcacggataatcgtcagagcatagggaatatcaccgagtatctctatcgaacgggg
gaacacccctgcttcctcgaaatgccggccgtaaaccagaatgcgctggaacggcgttcg
gcctatatcgaaaccatggaaaggcttggcgttgaaccgatcgtccttcccatagaagca
aagaactggaatttcgaggaactgggctatcaggaggcaggccggatttttgatcgcggc
gggtttccgacgcgcacggttctgtgtgccaatgatcgtctggccttcggcgtgatctcc
gccgccttcgagcgtcggcgccatgtcggacgcgaagagggctgcgatcttcgtgttgcc
ggtcacgacgaccatcctctcagtcgcttcacctgtccgccgctgacgacggttgcgcag
gattatcggcaaatcgcgcaattgggtctcgatatgcttttctcgcggatcaatgcgcag
gaaagcggggtagccgtcgagaaggaaattcgccgtctcgatagccacctcatcatgcgc
ggctctgcgtga
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