Oceanisphaera avium: CBP12_09225
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Entry
CBP12_09225 CDS
T04855
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
ocm
Oceanisphaera avium
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocm03016
]
CBP12_09225
Enzymes [BR:
ocm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
CBP12_09225
Transfer RNA biogenesis [BR:
ocm03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
CBP12_09225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
MTS
Methyltransf_4
Met_10
Methyltransf_11
Methyltransf_15
Methyltransf_12
Cons_hypoth95
DUF3164
PrmA
Sipho_tail
AAA_31
TehB
Motif
Other DBs
NCBI-ProteinID:
ART80303
UniProt:
A0A1Y0CYA4
LinkDB
All DBs
Position
1998488..1999585
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AA seq
365 aa
AA seq
DB search
MSTVVNPSTYQAQLDAKVVQLQQAFAPFNPPSLDVFASEPEHYRMRAEFRVWHEDEDLYY
IMFDQETKQRYRVEQFPAASLLINQAMPLLLAALKPDAVLRRSLFQVDFLSSLSGELVIS
LLYHRQLDDEWQQAMQKVRDQLQAQRINASIIGRARKQKLVLGQDYVVEKLQVAGKELIY
QQVENSFTQPNGRMNEQMLSWAVAATQGASGDLLELYCGNGNFSLALAANFKRVLATEIA
SSSVKSAQFNIAANNIDNVTILRMSAEEFTQAMRGVREFRRLRGIDLSDYDCNTILVDPP
RAGLDQETVKLVQEYDNILYISCNPETLQHNLVSLSNSHTIEHFALFDQFPYTHHVEAGV
YLKRR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagtggttaatccgagcacctatcaagcccagttggacgctaaagtcgtgcag
ctgcagcaggcgtttgcgccttttaatccaccaagcttggatgtgtttgcatcagaaccg
gaacattaccggatgcgcgccgagtttcgggtatggcatgaagatgaagacttgtattac
atcatgtttgatcaagagactaaacagcgctatcgagttgaacaatttcctgccgcctca
ctattaattaaccaagcaatgccgctattacttgccgctcttaaaccagatgccgtgtta
cggcgcagtttatttcaggtggattttttatcctctttaagtggcgagctagttattagc
ttactttatcaccgccaattagatgatgagtggcagcaagcgatgcaaaaagtacgcgac
caactgcaagctcaaaggataaatgccagtattattggtcgggctcgcaagcaaaaatta
gtactgggccaagattatgtagtggaaaaattacaggtggccggtaaagaattaatttat
cagcaagtagaaaacagctttactcaacctaatggccgcatgaatgagcagatgctgagc
tgggcagtcgctgccacccaaggtgcgagtggcgatttattagagttatattgtggtaat
ggtaacttttctctggcgttagccgctaattttaagcgcgtattagccaccgaaattgcc
agctcttcagtaaaatcagcacaatttaatattgccgccaataatatcgacaatgtcact
atattacggatgtcggcagaagaatttactcaggcgatgcggggagtgcgcgagtttcgc
cggctgcgcggcatcgatttaagtgattatgactgcaatacgattttagtggatccgccc
cgtgctgggctagatcaagaaacggttaaactggtgcaagagtatgacaatattctctat
atctcatgtaacccagagactttgcagcataacttagttagtttgagcaacagtcatacc
attgagcactttgcactctttgatcagtttccttatacccatcacgtagaagcgggggtc
tatctaaaaagacggtga
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