Oceanobacillus zhaokaii: CUC15_11340
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Entry
CUC15_11340 CDS
T05570
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
ocn
Oceanobacillus zhaokaii
Brite
KEGG Orthology (KO) [BR:
ocn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocn03019
]
CUC15_11340
03009 Ribosome biogenesis [BR:
ocn03009
]
CUC15_11340
Enzymes [BR:
ocn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CUC15_11340
Messenger RNA biogenesis [BR:
ocn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CUC15_11340
Ribosome biogenesis [BR:
ocn03009
]
Prokaryotic type
rRNA helicases
CUC15_11340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
GerD
Motif
Other DBs
NCBI-ProteinID:
AXI09474
UniProt:
A0A345PHJ4
LinkDB
All DBs
Position
complement(2217998..2219317)
Genome browser
AA seq
439 aa
AA seq
DB search
MNNSGFNQFSFQESTMEVVRKLNFTEPTEVQKKVIPAVLEGQSVIGQSRTGSGKTHAFLL
PLFDRLDASKRTVQMVITAPTRELATQLHDEVKKVIQHAGKEGIWLSKLLVGGTDKQKMI
DKLKEPPHIIVGTPGRILDLVKEEALSIYSAQSFVVDEADLMLDLGFINDVDQLLIRSKE
NVQLLVFSATIPERLQHFFKKYLENPLYIKVSDHFSPETMEHRLVALKHRNEADVIIDIS
KAIQPYLAIIFTNGKQLANDLAASLQERGMDVGLIHGGLTPRERKRVLKEIQNLRYQYIV
ATDLAARGIDIKGVSHVINAQIPKEEEFYIHRVGRTARAGMEGTAISLYNESDVKLIEKL
EDKGLTFKYVDVKNGEWKEAKPWNERHLRTKTTTNIEKEAWKQVRKAKKVKPGYKKKMKQ
QQESIKKQLTRKSRFNRGK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaataatagtgggtttaatcaattttcatttcaggaatcgaccatggaagtggttcgt
aaactcaattttactgagccaacagaggtacagaaaaaggtaattccagcagttttagaa
gggcaaagcgtaattggacaatcacgaacagggtcaggcaagacacatgcgtttttactt
ccattatttgatcgtcttgatgcaagtaagcggaccgtacaaatggtgattacagcgcct
acaagggagctggcaacccaattacatgatgaagtaaagaaagtcatccagcatgctgga
aaggaaggaatatggttatctaaattgcttgttggcggaactgataagcagaagatgatt
gacaagttaaaggagccaccgcatattattgttggaacgcctggtagaatattggattta
gttaaagaggaagcattgtcgatttattctgcacaatcttttgttgtagatgaagcagac
ttaatgcttgatttaggatttatcaatgatgtagaccaattgttaattcgttctaaggag
aatgttcaattactagtattctcagcaactattccagagcgattacagcatttcttcaaa
aaatatctagaaaatccattgtatattaaggtatcagatcatttttcacctgagacaatg
gaacatcggcttgttgccttgaaacatcgcaatgaagcggatgttattatagatatatcg
aaagcaattcagccatatttagcgattatttttacaaacggtaaacagcttgcgaatgac
ttagctgcgtcccttcaagaaagaggcatggatgtgggcttaattcatggtggcttaaca
ccgagagaaagaaaaagagtgcttaaggaaattcaaaaccttcgttatcaatatatagtt
gcgaccgatttagctgctagagggattgatataaaaggagttagccatgtcattaatgcg
cagattccaaaagaggaagaattttatattcatcgggttggcagaacagcaagagcagga
atggaaggaaccgcaatcagcctatataatgaatccgatgtgaagcttattgagaaatta
gaagataaaggtcttacttttaagtatgttgatgtaaaaaatggggaatggaaagaagcc
aagccttggaatgaacgtcatttaagaactaaaactacaacaaatattgaaaaggaagca
tggaagcaagtccgtaaagcgaaaaaggttaaacctgggtacaagaagaaaatgaaacag
caacaagaatcaattaagaagcagttgacaaggaaatctagatttaatcgcggcaaataa
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