Ornithinimicrobium cryptoxanthini: NF557_04525
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Entry
NF557_04525 CDS
T08994
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ocp
Ornithinimicrobium cryptoxanthini
Pathway
ocp03420
Nucleotide excision repair
ocp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ocp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NF557_04525 (pcrA)
03430 Mismatch repair
NF557_04525 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocp03400
]
NF557_04525 (pcrA)
Enzymes [BR:
ocp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NF557_04525 (pcrA)
DNA repair and recombination proteins [BR:
ocp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NF557_04525 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NF557_04525 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
USQ77185
LinkDB
All DBs
Position
949251..951680
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AA seq
809 aa
AA seq
DB search
MSTLFDNVPLPPMSPAQASGSVPVDHAGVPLWAREEQPAPDFASQERVSSPVDTDALLAG
LNGPQREAVIHEASPLLIVAGAGSGKTRVLTHRIAYLLAARGVAPGQVLAITFTNKAAAE
MRERVEALIGPRAKAMWVSTFHSACVRILRREAATVGLKSTFSIYDAADSQRLMALVVRD
LDLDPKRYPARALCHKVSAAKNELIDDETFASQVGNNPYEAQVAAAYREYQRRLRQANAL
DFDDIISMTVNILQAFPAVREHYRRRFRHLLVDEYQDTNHAQYTLIRELVGTDDEEVPPA
ELCVVGDADQSIYAFRGATIRNIVEFEKDYPQARTILLEQNYRSTQRILQAANSVISRNP
GRRDKSLWSDLGEGPMIVGYVADDEHDEASFVAQTIDKLGDEHGVQPKDVAVFYRTNAQS
RALEEVFVRTGHPYKVVGGTRFYERREVKDALAYLRVIANPADDINLRRIINVPKRGIGD
RAQAAVATLAQRERVPLVAALGRVEDAPGIATRSVAAIKAFTALLEGLGQVASDLESGVG
DLLEAILDRSGYTKELRASHDPQDETRIENLAELVAVAREFDENYPEGSLVDFLEQVSLV
ADADEIPQGGPGTDGGVITLMTLHTAKGLEFPVVFLTGLEDGTFPHQRSMDDPVELEEER
RLAYVGITRARQRLHLSRAGTRAAFGAPQYHPPSRFLDEIPMDVVDWQRSDRDRMSAAGR
PSASVQQGWGGGQRSASRGVVQLNPRGSGVRKAIEPVSVSAGDRVSHDSFGLGTVVRVEG
SGDHTMAHVDFGGSGVKRLLLRYAPLEKL
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgctcttcgacaacgtcccgctgcccccgatgtcacctgcccaggccagcggg
agcgtgcccgtggaccacgccggcgtgcccctgtgggcgcgggaggagcagccggcgccg
gacttcgcgtcgcaggagcgggtgtcttccccggtcgacacggacgccctgctcgcgggg
ctcaacgggccgcagcgcgaggccgtgatccacgaggcgtccccgctgttgatcgtggcc
ggggccgggtcgggcaagacacgggtgctgacccaccggatcgcctatctgctggcggcc
cgcggtgtggccccgggccaggtgctggcgatcaccttcaccaacaaggccgctgctgag
atgcgcgagcgggtcgaggcgctgatcggtccgcgggcgaaggccatgtgggtctccacc
ttccactcggcgtgcgtgcggatcctgcggcgcgaggcggccacggtcggtctgaagtcc
accttctcgatctatgacgccgccgacagccagcgactgatggcgctggtcgtgcgtgac
ctggacctcgaccccaagcgctatcccgcgcgggcgctgtgccacaaggtgtctgccgcc
aagaacgagctgatcgacgacgagacctttgcgtcgcaggtgggcaacaacccctacgag
gcgcaggtggcggcggcctaccgtgagtaccaacgccgcttgcggcaggccaacgccctc
gacttcgacgacatcatctcgatgacggtcaacatcctgcaggcgttcccggctgtccgg
gagcactaccgccgccggttccgccacctgctggtggacgagtaccaggacaccaaccac
gcgcaatacaccctgatccgtgagctggtcggcaccgacgacgaggaggtgccccctgcg
gagctgtgcgtcgtcggtgacgccgaccagtcgatctatgccttccggggcgccaccatc
cgcaacatcgtcgagttcgagaaggactacccgcaggcgcgcaccatcttgttggagcag
aactaccgctcgacccagcggatcctgcaggcggccaactcggtgatctcgcgcaacccg
gggcgccgggacaagagcctgtggtcggacctgggcgagggcccgatgatcgtgggttat
gtcgccgatgacgagcacgatgaggcctcgttcgtggcgcagacgatcgacaagcttggt
gatgagcacggcgtgcagcccaaggacgtcgcggtcttctatcgcaccaatgcccagtcc
cgggcgctggaggaggtgttcgtgcggaccgggcacccctacaaggtcgtgggtgggacc
cggttctatgagcgtcgcgaggtcaaggacgcgctcgcctatctgcgggtgatcgccaac
cccgccgacgacatcaacctgcggcgcatcatcaatgtccccaagcgggggatcggtgac
cgggcgcaggcagctgtggccacgctggcccagcgcgagcgtgtcccgctcgtggccgca
ctcggcagggtcgaggacgcgccggggatcgcgacccggtcagtggcggcgatcaaggcg
ttcaccgcactgctggagggactgggtcaggtcgcgtccgacctcgagtcgggggtgggg
gacctgctggaggcgatcctggaccgctcgggttacaccaaggagctgcgggccagccac
gacccgcaggatgagacccgcatcgagaacctcgccgaactggtcgccgtcgcccgcgag
ttcgacgagaactaccccgaggggagtctggtcgacttcctggagcaggtgtcgttggtc
gccgatgccgacgagatcccgcagggtgggccgggcaccgacggcggtgtcatcacgctg
atgacgctgcacacagccaaggggctggagttcccggtggtctttctcaccgggctggag
gacggcaccttcccgcaccagcggtcgatggatgacccggtggagctcgaggaggagcgc
cggctcgcctatgtgggcatcacccgtgcgcgacaacgactccacctcagccgggccggc
acgcgggccgccttcggagcgccgcagtatcacccaccctcgcggttcctcgacgagatc
ccgatggacgtcgtcgactggcagcgctcggaccgggaccggatgagtgcggccggccgc
ccgagtgcctcggtgcaacagggttggggcggcgggcagcgctctgcctcgcgcggcgtc
gtgcagctgaacccgcgcggctcgggcgtgcgcaaggccatcgaacccgtctcggtctcc
gccggcgaccgggtgagtcacgactcgttcgggctggggaccgtggtgcgggtcgagggc
agcggcgaccacaccatggcccacgtcgacttcggcggctcgggggtcaagcggctgctc
ctgcgctacgcgccgctggagaagctctag
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