Oceanotoga sp. DSM 15011: OF820_04390
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Entry
OF820_04390 CDS
T08543
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ocs
Oceanotoga sp. DSM 15011
Pathway
ocs00521
Streptomycin biosynthesis
ocs00523
Polyketide sugar unit biosynthesis
ocs00541
O-Antigen nucleotide sugar biosynthesis
ocs01100
Metabolic pathways
ocs01110
Biosynthesis of secondary metabolites
ocs01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ocs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
OF820_04390 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
OF820_04390 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
OF820_04390 (rfbC)
Enzymes [BR:
ocs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
OF820_04390 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
FdtA
Motif
Other DBs
NCBI-ProteinID:
UYP00927
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All DBs
Position
complement(886971..887501)
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AA seq
176 aa
AA seq
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MDIRELEIKNVYQIKNKLYEDKRGYFSEIYRKNDYEFLKTNFVQENYSFSNKYTLRGMHY
QIKKPQAKLIRCLNGQIIDVILDLRKNSETYLKALSIKLDKNYTLYIPKGIAHGFLALKD
ETIVYYKTDEYFNSNDEDGFIWKDPKIFEYWNLKEFNIKEEQLILSHKDKHWGYLR
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggatattagagaacttgaaataaaaaatgtttatcaaataaaaaataaattatatgaa
gataaaaggggatatttttcagaaatatatagaaaaaatgattatgaatttttgaaaact
aattttgttcaagaaaattattctttttcaaataaatatactttgagaggaatgcattat
caaataaaaaaaccgcaagcaaaattaataagatgtttaaatggtcaaataatagatgtt
atattagatctcagaaaaaattcagaaacttatttaaaagctttatctataaaattagat
aaaaattatacattatacattccaaaaggaatagcacatggatttttagctcttaaagat
gaaactattgtatattataaaactgatgaatattttaattctaatgatgaagatggattt
atatggaaagatccaaaaatatttgaatattggaatttaaaagaatttaatataaaagaa
gaacaattgatattgagtcataaagataaacattggggatacttaagatga
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