Oryctolagus cuniculus (rabbit): 100338745
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Entry
100338745 CDS
T03373
Name
(RefSeq) general transcription factor IIH subunit 2-like protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03022
Basal transcription factors
ocu03420
Nucleotide excision repair
ocu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100338745
09124 Replication and repair
03420 Nucleotide excision repair
100338745
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100338745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
100338745
03400 DNA repair and recombination proteins [BR:
ocu03400
]
100338745
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100338745
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100338745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
IBR
Motif
Other DBs
NCBI-GeneID:
100338745
NCBI-ProteinID:
XP_051709379
LinkDB
All DBs
Position
11:complement(3822666..3876437)
Genome browser
AA seq
504 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDSSTEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDPFQEIPLEENKGERFCYGCQGELKDQHVYVC
SACQNVFCVDCDVFVHDSLHCCPGCIHKLPAPSVASFVTGYEEILESFSKCEFLQSKKTS
EEIIQYIQSYEGIVDMTLMAMTASLLMKTSGGIPLRTGPTSHLWGLRLWPERVFSTQAYA
SRLYGGVLKLDDTLYQDGKVFFCS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagagcctgaaagaaccaagcggtgggaaggaggctatgagagaacatgggag
attcttaaagaagatgaatctggatcactaaaagccacaatagaagacattcttttcaag
gcaaagaggaaaagagtatttgagcaccatggacaagtacgactgggaatgatgcgccac
ctttatgtggtggtagatggatcaagaacaatggaagaccaagatttaaagcctaataga
ctgacatgtactttaaagttattggaatactttgtggaggaatattttgatcaaaatcct
attagtcagattggaataattgttacaaagagtaaaagagctgaaaaactgactgaactc
tcaggaaacccaagaaaacatataacgtctctgaagaaagctgttgatatgacctgccat
ggagaaccatctctttataattccttaagtatggccatgcaaactctaaaacacatgcca
ggacatacaagtcgagaagtcctaatcatctttagcagccttacaacttgcgacccatca
aacatttatgatctaatcaagaccctaaaggcagctaaaattagagtgtctgttattgga
ctgtctgcagaggttcgagtgtgcactgtacttgctcgtgaaactggtggcacgtaccac
gttattttggatgaaagccattacaaggaactgctgacacatcatgttagcccacctcct
gccagctcgagttctgaatgctcacttattcggatgggatttccccagcacaccattgct
tctctgtctgatcaagatgcgaaaccctctttcagcatggcgcatttggacagcagtact
gagccagggctcacattaggaggttatttctgcccacagtgtcgggccaagtactgtgag
cttcctgttgagtgtaaaatctgtggtcttactctggtgtctgctccgcatttggctcgg
tcttaccatcatttatttcctttggatccttttcaagaaattcccctagaagaaaataaa
ggagaaagattttgctatggctgtcagggggaattgaaagaccaacatgtctatgtttgc
tctgcgtgccagaatgtcttctgtgtggactgtgatgttttcgttcatgactctctccac
tgttgtcctggctgtattcataaacttccagctccttcagtggccagcttcgtgacaggc
tatgaagagatattggagtctttcagcaaatgtgaatttcttcaaagtaagaagacttca
gaagaaattatccagtatattcaaagctacgagggaattgttgacatgacgcttatggca
atgacagcgtctttgctaatgaagacctccggcgggattcctttaagaactggccccaca
agtcacctgtgggggctgcggctctggcccgagcgggtcttttctacacaggcttacgca
tcacggctttatggtggagtcttgaaactggatgataccctgtatcaggatgggaaagtt
ttcttctgttcctag
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