Oryctolagus cuniculus (rabbit): 100341564
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Entry
100341564 CDS
T03373
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03013
Nucleocytoplasmic transport
ocu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100341564
03015 mRNA surveillance pathway
100341564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100341564
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100341564
mRNA cycle factors
P-body specific factors
100341564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
100341564
NCBI-ProteinID:
XP_002720171
Ensembl:
ENSOCUG00000010213
UniProt:
G1SYU5
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All DBs
Position
X:complement(68527919..68544411)
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AA seq
483 aa
AA seq
DB search
MKEEKDHRPKEKRVTLLTPQGATGSVGGTSGDCGKGDDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYATDNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRVPERDKLRDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKRDK
AKKLDKENLNDERTSGQSCTLPKRSDVEYKDEKPKRPEDDSGRDYRERDRDYERDQERIL
RERERLKRQEEERRRQKERYEKEKAFKRKEEEMKKEKEALRDKGKKNESTESLGSSEKTE
KKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDSTKSGDSAIDKKQESGISHRKEG
GEE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagagaaggaccacaggcctaaggagaagcgagtaaccctgttaacgccccag
ggagccacaggcagcgtcggtgggacttcgggggactgcggcaaaggggacgataagcag
gatcgcaataaagagaagaaagaggcgctgagcaaggtggtaattcgaagattacctccc
actctgaccaaggagcagcttcaggaacatcttcaacccatgcctgagcatgattatttt
gagtttttttctaatgatactagtctgtatcctcatatgtatgccagagcatacatcaac
tttaaaaaccaagaggacattatcttgttcagggatcggtttgatggctatgtattcctt
gacaataaaggtcaggaatatcctgctatagtagaatttgcaccttttcaaaaagctgca
aaaaagaagactaagaaaagagataccaaagttggaactattgatgatgatccagaatat
agaaaatttttggaaagttatgctacagacaatgagaaaatgacatctactccagagaca
ctgctagaggaaatagaagcaaaaaatagagaattaatagctaaaaagacaaccccactt
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaagagagaagaaagaaggcga
cgagaaatagaaagaaaacggcagagggaagaagagagaagaaagtggaaagaagaagag
aaacgaaaaaggaaagatatagaaaagctgaagaagatagacagagttccagaaagggac
aaattaagggatgaaccaaagataaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatttgctcaagaaaccagaaaagggagatgaaaaagaattggacaaaagagacaaa
gccaagaaactggataaagagaatctgaatgatgagcgaaccagtgggcaaagctgtacg
ttgcccaagcgttctgatgttgaatataaagatgaaaagccaaagagacctgaagatgac
agtggcagagactacagggagagggatcgcgactacgaacgagatcaggagcgcatactg
agagagagagagagactgaagcggcaagaagaagagcgccgtaggcagaaggagcgttat
gagaaagagaaggcttttaagagaaaagaagaagaaatgaagaaagaaaaagaagcactt
cgggataaaggaaagaagaatgaaagcacagaatcattaggcagctcagaaaaaactgaa
aagaaagaggaagtggttaagagagatcgcataagaaacaaggatcgcccagcaatgcag
ctttaccaaccaggagctcgaagccgaaatcgactctgtccccctgacgacagcaccaag
tctggagattcagcaatagacaaaaagcaggaaagtggtattagccatagaaaagaaggg
ggagaggagtga
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