Oryctolagus cuniculus (rabbit): 100348785
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Entry
100348785 CDS
T03373
Name
(RefSeq) LOW QUALITY PROTEIN: single-minded homolog 2
KO
K09100
single-minded
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ocu03000
]
100348785
Transcription factors [BR:
ocu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100348785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIM_C
PAS_3
PAS_11
PAS
PAS_9
HLH
PAS_4
Per3-like_PAS-A
Motif
Other DBs
NCBI-GeneID:
100348785
NCBI-ProteinID:
XP_051689597
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MKEKSKNAAKTRREKENGEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRAVFPEGL
GDAWGQPSRAGPLDSVAKELGSHLLQTLDGFVFVVASDGKIMYISETASVHLGLSQVELT
GNSIYEYIHPSDHDEMTAVLTAHQPLHHHLLQEYELERSFFLRMKCVLAKRNAGLTCSGY
KVIHCSGYLKIRQYMLDMTLYDSCYQIVGLVAVGQSLPPSAITEIKLHTNMFMFRASLDL
KLIFLDSRVTELTGYEPQDLIEKTLYHHVHSCDAFHLRYAHHLLLVKGQVTTKYYRLLSK
LGGWVWVQSYATVVHNSRSSRPHCIVSVNYVLTDIEYKELQLSLDQVSTSKSQDCWRAAL
STSQETRKLAKPKSTKMKTKLRTNPYPPQQYSAFQMDKLECGQLGTWRASPPAGGPAPPE
QQLPSESSDLLYAPSCGLPFSYHYGHFPLDSHVFTSKKPMLPAKFGQPPGSPCEVARFFL
SALPASGECQWHYASPLVPGSASPAKSLSEPPLAAARHSLVPNYEAPPAAAVAASRRFGE
DNAPPPPPSFPSCGHYREESALGPAKAARDAARLALARAAPECCAPPAPEPPGAPAQLPF
VLLNYHRVLARRGPLGGAAAATAPGLSCGPGGPDAAGAMRSRLPSPRGRRRRVAAPPPGA
PRPHYLGASVIITNGR
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagaagtccaagaatgcggccaagaccaggagggagaaggaaaatggcgagttc
tacgagctggccaagctgctcccgctgccgtcggccatcacctcgcagctggacaaagcg
tccatcatccgactcaccacgagctatctgaagatgcgcgccgtcttccccgaaggtcta
ggtgacgcctggggacagcccagccgcgccggacccctggacagcgtcgccaaggagctg
ggatcgcacttgctgcagactctcgatggatttgtttttgtggtagcatctgatggcaaa
atcatgtacatatccgagacggcttctgtgcacctgggcttgtctcaggtggaactcacg
ggcaacagcatctacgagtacatccacccctccgaccacgacgagatgacggctgtgctc
acggcccaccagcctctccaccaccacctgctccaagagtacgagctagagaggtcgttc
ttcctccgaatgaagtgtgtcttggcgaaaagaaacgcgggcctgacgtgcagcggatac
aaggtcatccactgcagcggctacttgaagatcagacagtacatgctggacatgaccctg
tatgactcctgctaccagatcgtggggctggtggccgtgggccagtcgctcccacccagt
gccatcacggagatcaagctgcacactaacatgttcatgttcagggccagcctcgacttg
aagctgattttcctggattccagggtgaccgagctgacgggctacgagccacaggatctg
atcgagaagacgctgtaccaccacgtgcacagctgcgacgccttccacctgcgctacgcg
caccacctcctgctggtgaaaggccaggtcaccaccaagtactaccggctgctgtccaag
ctgggcggctgggtgtgggtgcagagctacgccacggtcgtgcacaacagccgctcgtcc
cggccccactgcatcgtgagtgtcaattatgtcctcacggatatcgaatacaaggaactg
cagctgtccctggaccaggtgtccacgtccaagtcccaggactgctggagggccgccttg
tctacctcacaggaaactaggaaattagctaagcccaaaagcaccaagatgaagacgaag
ctgagaacaaacccttacccaccccagcaatacagcgcattccaaatggacaaactggag
tgcggccagctcggaacctggagagccagccccccggccggcggcccggcccccccagag
cagcagctgccttcggagagcagcgaccttctgtacgcgccctcctgcggcctgcccttc
tcctaccactacggacacttccccctggactcgcacgtcttcaccagcaaaaagcccatg
ctgccggccaagttcgggcagcccccgggctccccgtgcgaggtggcacgcttcttcctg
agtgcgctgccagccagcggcgagtgccagtggcattacgccagccccctggtgcccggc
agtgcttctccagctaagagcctttcagagccccccctggccgctgctcggcacagcctc
gtgccaaactacgaagcgccccccgccgccgccgtcgccgcctcgcgcaggttcggcgag
gacaacgcgcccccgccgccgccgagcttcccgagctgcggccactaccgcgaggagtct
gcgctgggcccggccaaggccgcccgggacgcggcgcgcctggcgctggcccgcgcggcg
cccgagtgctgcgcgccgccggccccggagcccccaggcgcgccggcgcagctgcccttc
gtgctgctcaactaccaccgcgtgctggcccggcgcgggccgctggggggcgccgccgcc
gccaccgcgcccggcctgagctgcggccccggcggccccgacgcagccggcgcgatgcgg
tcccggctcccgagcccccgcggccgccgccgccgcgtcgccgccccgccacccggcgcg
ccgcggccgcactacctgggcgcctcggtgatcatcaccaacggcaggtga
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