Oryctolagus cuniculus (rabbit): 127493056
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Entry
127493056 CDS
T03373
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03022
Basal transcription factors
ocu03420
Nucleotide excision repair
ocu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127493056
09124 Replication and repair
03420 Nucleotide excision repair
127493056
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
127493056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
127493056
03400 DNA repair and recombination proteins [BR:
ocu03400
]
127493056
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
127493056
DNA repair and recombination proteins [BR:
ocu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
127493056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
127493056
NCBI-ProteinID:
XP_051710835
LinkDB
All DBs
Position
12:complement(132835086..132840539)
Genome browser
AA seq
463 aa
AA seq
DB search
MESTPSRGGLNRVHLQCRNLQEFLGSLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRM
LFLEQPLPQAAVALWVKKEFSKAQEQSTGLLSGLRIWHTQLLPGGLQGLILNPVFRQNLR
VALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLL
SQAGLMKSAEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQ
LSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVSGAGG
TVHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGI
TAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFE
LLLAHARELGVLVFENSAKRLMVVTPAGHSDVKRFWKRQKHSS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggagagtaccccttctaggggtggactgaaccgggtgcatctacaatgcaggaatctg
caggaattcttagggagcctaagccctggggttttggatcgattgtatgggcaccctgcc
acctgtctggctgtcttcagagagctcccatctttggctaagaactgggtgatgcggatg
ctctttctggagcagcctttgccgcaagctgccgtagccctgtgggtgaagaaggagttc
agcaaggctcaggagcaaagtacggggctgctgagcggcctccggatctggcacacccag
ctgctccctggaggcctccagggcctcatcctcaaccccgtcttccgccagaacctccgc
gtcgcccttctcggtggggggaaggcctggtctgatgacacaagtcagctgggacccgac
aagcatgcccgggatgtcccctccctcgacaagtacgcagaggagcgatgggaggtggtc
ttgcacttcatggtgggctccccgagtgcggccgtcagccaggacttggcccagctcctc
agtcaggctgggctcatgaagagtgccgagccaggagagcccccctgcattacctctgcc
ggcttccagttcctgctgctggacacgcccgcccagctctggtactttatgctgcagtat
ctgcagaccgcccagagccggggcatggacctcgtggagattctctccttcctgttccag
ctcagcttctctactctgggcaaggattactctgtggagggtatgagtgactccctgctg
aacttcctgcaacatctgcgtgaatttggcctcgtcttccagagaaagaggaagtcccgg
cgctactaccccacgcgcctggccatcaatctctcatctggcgtctctggggctgggggc
actgtgcaccagccgggcttcattgttgtggaaaccaactaccggctgtatgcctacacg
gagtcggagctgcagatcgcgctgatcgccctcttctccgagatgctctatcgcttcccc
aacatggtggtggcgcaggtgacccgggagagcgtgcagcaggccattgccagcggcatc
acggcccagcagataatccacttcctaaggacaagggcccacccagtgatgctcaaacag
acccccgtgctgccccccaccatcacggaccagattcgcctgtgggagctggaaagggac
aggctgcggttcacggagggcgtcctgtacaaccagttcctgtcgcaagtggacttcgag
ctgctgctggcccacgcgcgggagctgggcgtgctggttttcgagaactcggccaagcgg
ctcatggtggtgaccccggccgggcacagcgacgtcaagcgcttctggaagcggcagaag
cacagctcctga
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