Oryx dammah (scimitar-horned oryx): 120865054
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Entry
120865054 CDS
T07255
Symbol
DDX60
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
oda
Oryx dammah (scimitar-horned oryx)
Brite
KEGG Orthology (KO) [BR:
oda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oda03019
]
120865054 (DDX60)
Enzymes [BR:
oda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120865054 (DDX60)
Messenger RNA biogenesis [BR:
oda03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
120865054 (DDX60)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
Abhydrolase_11
Motif
Other DBs
NCBI-GeneID:
120865054
NCBI-ProteinID:
XP_040098049
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MGPPGLLVSVGLSLQWLGAEFRVPTRACGRSLQGECRVRAITPPGTGDQVWPVGCVEMNF
LIEMRSSETSKVSVRRKKSTHVDTWVGSETVMPSWWFGQDLYFFYXIECYLMNLISXGGQ
FAIILVKDAEHAYFNFQELRALRTALILHLQHNTNIDVQTTFSGCWSQEWITFLEGSCPY
FLIXWSMKVSAVLFSGQSSDILLLYVYFMQSKYKNQMFFHKNEKNIENAYKALMEELEEC
RALALGRLFGNLKWKIMMEEVDGKKEGIKTALNVKYEKASCETTEELNTAVQMVKRICFV
MEKYPELLQEADQQLIARCLRCLGFKELASSLHPVHNGIKEKKKDKYSMGLGPARFQLQY
MDHYLXRDERKDPDPRVQDFVPDNWQQELLDIVDKNKSAVIXAPKSSGKTYASSCCLERV
LHEGNGCVVVYVAPTEALLNXVAATIENHFNENLPNGESLRGVFTWDYCHDALNSQVFIT
VPACFEILLLAPYHQVWVKRIRYVIFDEVHCLGEEIGAEIWKHLIIILCPFLALSTTISN
PEHLTXXYVIXILRWLQSVKRYCKQADSVIENSIASXRNASCRASSHKNYLLMKQSCKVR
LVLDEERFNDLEKYIWSVSNRDISFDHFPLCAALTTDHIEKFGFPSDLTLSPQEMVQLYD
TTMFEFWKSCLRAQELCPEEXNNSFYFENKIVIRKMDARKCEESLKAELTSWVKNGHTNK
ARMVLESVHPPSVCGPLVVENMAIMFLLLVAKLRGIEKLPASFFLXVIXGVERRAESVKK
FLQQKQERRRPPRADEEAHDVANKLHKEKKKSMEKYKAVPYADCGRRVEARSCVVCYGGG
SRYHHGSMEIRQGQMVETLFRLKHIKMVTATSTLALGVNMPCHVNLLFLWKILFFFLDAL
SFRQMSGHAGRHGKDLTGSVFFYNIPLPKTERLLRSNVPELNDWFPLNLSLVLRRMLLVA
KADDKEDANAKALSVLQHSLMSFKQPNIKCMLKFYFIYSLQFLVTEGFLDQECVPIGYSG
LVFRLHCHKPSKFVLVSLLVKGLFYKLCVPTDIKGRKTFSGDIMETLVVVLANLFGRRYF
PQCVKNFGKRFFSFSLDKMAPEKGRQLGRKIITIHSSLVVLKALPEDLPTVAKEHNDRVQ
NVVSFLLPISKLADMRKECQLPLSETGQMVKVKAAVSPALDTVPTPGIVSEM
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgggcccccccgggctgctggtctcagtgggcctcagcctgcagtggcttggagcagag
tttcgggtccccaccagagcctgtggtcggtcactgcagggagagtgccgagtccgagcc
attacaccaccagggaccggggaccaagtttggcctgtcggctgtgtagagatgaatttc
ctcatagagatgagaagtagtgaaactagtaaagtgtctgttaggaggaaaaagagtacc
catgtagacacatgggtgggctcagagacagtcatgccctcgtggtggtttggacaagac
ctgtacttcttctacntgattgaatgctacctcatgaatctaattagttaaggaggacag
tttgccatcattttagtcaaggatgctgaacatgcatatttcaacttccaggaacttcgt
gctctgagaacggcattaatcctccatcttcagcataataccaacattgatgttcaaaca
accttttctgggtgctggtcacaagagtggatcactttcctggaaggcagttgtccgtat
tttctgattnattggtcaatgaaggtcagtgctgtactcttctctggccagtcatctgat
atccttctactttatgtgtactttatgcagagcaagtacaaaaaccagatgtttttccat
aagaatgaaaagaacattgagaatgcttataaggcgctgatggaggaactggaggaatgc
cgagctttagcattaggacgtctttttggaaacttaaaatggaaaattatgatggaagaa
gttgatgggaagaaagaggggatcaaaacagccctaaatgtgaagtatgaaaaggccagc
tgtgaaaccacggaagagttaaatacagctgtgcagatggtgaaaaggatctgctttgtg
atggaaaaatacccagagcttctgcaggaggcagaccagcaactcatagccaggtgcctt
cggtgtttagggttcaaggagctggcgagttctttgcatccagtgcataatggcataaag
gagaagaaaaaggacaaatactcaatgggccttgggccagcccggtttcagctgcagtac
atggaccactatctgnggcgtgatgagaggaaagatccagaccccagagttcaggacttt
gttcctgacaactggcagcaagagctcctggacatcgtggacaagaacaagtctgcagtc
atcntggcccccaagtcctcagggaagacctacgcctcctcctgctgcctggagagggtg
ctgcatgagggcaatgggtgcgtggtcgtgtacgtggcccccaccgaggcccttctcaat
taagtggcagcaaccattgagaatcattttaacgaaaatctgccaaatggggaaagtctg
cgtggtgttttcacctgggactattgtcatgatgccctaaactctcaggtgttcatcaca
gtgcctgcctgctttgaaattctgctgctggctccgtaccaccaggtgtgggtgaaaagg
atcagatacgtcatatttgatgaagtccattgtcttggtgaggaaattggagcagaaatc
tggaaacatctcatcattatcctctgccccttcctggccctttccaccaccatcagcaac
ccggagcatctgacttgataatacgtaatttaaattttaaggtggctacaatctgtaaaa
cggtactgcaaacaagcagacagtgtgattgaaaacagtattgcttctnacagaaatgcc
agctgccgtgccagttcccacaaaaactacttgctgatgaagcagtcatgtaaagtgaga
cttgtgctcgatgaagagagattcaatgatttagagaaatacatatggtcagtgagcaat
cgtgacatttcctttgaccattttcccctgtgtgctgcgttgacaacggaccacattgaa
aagtttggattcccttccgatcttaccctttcacctcaagaaatggtccagctttatgat
accaccatgtttgaattctggaaaagttgtctcagagctcaggagttgtgtccagaggaa
taaaataattcattttattttgagaataaaatagtcattaggaagatggatgctagaaag
tgtgaagagagcttaaaggcagaactgacaagctgggtgaagaatggccacaccaacaag
gcaagaatggtcctggagagtgttcatcctccttcagtctgtggtcctttggttgttgaa
aacatggcaattatgtttctacttctcgttgcaaagctaaggggaatagagaagttacct
gcatcgttttttctgtgagtcatttagggcgtggagagaagggctgaaagtgtgaaaaag
tttctacagcaaaagcaggagcgcagaaggccccccagggcagatgaagaggcccacgac
gtggcgaacaaactgcacaaagagaaaaaaaaatccatggagaaatacaaggcagtacct
tacgcagactgtgggagacgagtagaggctagaagctgtgtggtctgttacggggggggc
agcaggtaccatcacgggtcgatggagattaggcagggacaaatggtggagacactcttc
aggctgaagcacatcaagatggtaacagctacgtcaactcttgctttgggagttaatatg
ccatgccatgtaaatctgttgtttttatggaagattctttttttttttttggatgcctta
agcttccgacagatgtccggccatgcaggcagacatgggaaggacctcacaggaagtgtg
tttttctacaacatcccattacccaagacagaacggcttctgagatcaaatgtgcctgaa
ctgaatgactggtttcctctaaacctttccttggtcctcagacgcatgctgttagttgcc
aaggcagatgacaaggaagatgccaatgccaaggcattgtcagttctccagcattcactg
atgtctttcaagcaaccaaatatcaagtgcatgctgaaattttattttatatattcttta
caattcttggtcacagagggattcctggatcaagagtgcgttcccattggatattctggg
cttgtcttccgtttacactgccacaaaccctccaagtttgttttagtgagcttgctggtg
aaaggtttattttacaagctgtgtgttccaaccgacatcaaaggccgaaagacattttct
ggagacataatggagactctggtggtggtgttagcaaatctttttgggcgacgatatttt
cctcagtgtgtgaaaaactttggaaagagatttttttcattcagtttggacaaaatggct
cctgaaaaaggcagacaacttggcagaaaaataattacaattcatagcagtttagtagtt
ctgaaggccctgcctgaggacttgcccactgtggcaaaggaacacaatgacagagttcag
aacgttgtttccttcctcctgccaatttctaagctggctgacatgagaaaagaatgccag
ctgcctctctcagagactggtcagatggtgaaggttaaggcagcagtgagcccggctctg
gatactgtgcccacgcccggcatcgtctcagagatgtag
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integrated database retrieval system
